| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2365 |
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| Symbol | |
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| ID | 4256745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2802128 |
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| End bp | 2803531 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123035 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_738409 |
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| Protein GI | 114047859 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0108211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.148457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGACAC TTTTTTCGCC TTTATTGCCA GCAAGACAAA GCCATATCGC ACTGCTGTGC
GCTGGCATTA TCTATTGGCT AACCGGCGCC TTAGGCCAAA CCTTATTTAG CTTGCAACCT
GAGAATATCA CCTTGATTTG GCTGCCCTCC GGTATTGCCT TGGTGATGTT ACTCATGTGG
GGGCGTAAGG CATTGGTGCT GATATTCCTC GGCAGTTTTA CTTTGAATTT TCAAGGCATG
TTGCAACAGG ATTCCCTTGG TCTTTCGCTG CTGCATACTT CAATTGCCGC GTTAAGCGAT
ATGCTCGCAC CTGCGATGTC GATGTTGTTA CTCAGACGCT TCTTGCCACA GGGTACGGGA
AGTGCGAATG ACTTGATGAA GTTTGTGGTG GTGGCGGGGA TCATTCCCTT TTTCGCCTCA
AGCGCATTGT TATCCGCTAA CTTAGTGCTT GGCGGTTATA TTTTACCGAG CGCGTTTTGG
AGTATGGGGC AAATGTTTTT CTTTGCCGAT ATTCTGGGCA TAGTGTTGGT GTATCAGCTG
TATGCAGGAT GGGTGGAACC CAATGCGCTG AACATTGCTA AAAAGCGCGA TATCCTTCTG
CCTTTGATTG GCTTGCCACT GTTTTGCTTG ATTGGCGTTA AGTTCGATCT GGGCTGGTTA
TTTTATGTGA TCCCACCTTT ATTAGTCGTA CTTTCCTTCG AGGTCACGCG CTTTTATCTT
GCGCTGTTTA GCAGCGCCTC CATGTTGTTT ATGATTTTAG CGACAGCCCA GGGCTATGGC
CCGTTTATCA ATGCTACGTC TTTTCAAACC AATGCCGAAA TGATGGCCTT TGTGCTGTCA
TCGGCATTAA CGGTTTTTGG CGTGTCATTA CAGCGGGCTC AGCTGCGCCG CACCGAGAAA
GATAAGCAGA CCGCGGTGCA AGAGGCGCTC TATGATCCCT TATCGGGGCT ACTGAATCGC
CGTGGTTTTA TGCCGCAGCT AACGAGTTTA ACTGGAACGT CGACGCGTTA TTCGGTCGCT
ATGTTGGATC TCGATAACTT TAAGATGATT AACGACACCT ATGGTCACAG TGTAGGCGAT
AGGGTTATTC AGCTGTTGGC ACAGCTGATT CATAATCATA GCCGCAGTCA AGATATTGCT
GCGCGCCTAG GCGGTGAAGA GTTCGCCCTT GTGCTAAGGG ATATTGATGT GGCGCAGGTG
TATCCCGTGC TTGAGCGTAT TCGAAAATCC TTTGCAGAGA TGTCGATAGC TGCCGAGGAG
CATACGATTT ACTGCACTGT GAGCATAGGT TGGGTGGAGT ATCAGCAAGG TATCACTGGC
GAGTCGTTGC TGCATTTGGC GGATAAGGCT TTGTATCAAG CCAAGGCACA GGGCAAAAAC
ACGATTGTAA AGTATCAAAC TTAA
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| Protein sequence | MKTLFSPLLP ARQSHIALLC AGIIYWLTGA LGQTLFSLQP ENITLIWLPS GIALVMLLMW
GRKALVLIFL GSFTLNFQGM LQQDSLGLSL LHTSIAALSD MLAPAMSMLL LRRFLPQGTG
SANDLMKFVV VAGIIPFFAS SALLSANLVL GGYILPSAFW SMGQMFFFAD ILGIVLVYQL
YAGWVEPNAL NIAKKRDILL PLIGLPLFCL IGVKFDLGWL FYVIPPLLVV LSFEVTRFYL
ALFSSASMLF MILATAQGYG PFINATSFQT NAEMMAFVLS SALTVFGVSL QRAQLRRTEK
DKQTAVQEAL YDPLSGLLNR RGFMPQLTSL TGTSTRYSVA MLDLDNFKMI NDTYGHSVGD
RVIQLLAQLI HNHSRSQDIA ARLGGEEFAL VLRDIDVAQV YPVLERIRKS FAEMSIAAEE
HTIYCTVSIG WVEYQQGITG ESLLHLADKA LYQAKAQGKN TIVKYQT
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