Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2364 |
Symbol | |
ID | 4256744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2800895 |
End bp | 2801935 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123034 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_738408 |
Protein GI | 114047858 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0136988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0569066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG AACTCAATCC ACTGGGCTTA CTCGGTATCG AATTTACCGA ATTTGCCAGC CCCGATAGCG ATTTTATGCA CAAAGTGTTT ATCGACTTTG GTTTTTCACT GCTGAAAAAA GCCAAAAATA AAGACATTTT GTACTACAAA CAAAATGACA TTAACTTCCT GCTCAATAAT GAGCGCGAAG GGTTTTCGGC AGAATTTGCC AAATCCCACG GCCCAGCCAT TAGCTCTATG GGCTGGCGCG TAGAAGATGC CAGCTTTGCT CACCGTGTGG CGGTAGAGCG CGGCGCCAAA GCTGTGGCCG ATTCGGCCAA GGATCTGCCT TATCCAGCCA TTTATGGTAT TGGTGACAGC TTAATTTATT TTATCGACAC CTTCGGTGCC GACAACAATA TCTATGCAAC TGACTTTGAA GACTTAAGTG AGCCTGTGAT CACCCAAGAG AAAGGCTTTG TCGAAGTAGA CCATTTAACC AATAACGTCT ACAAAGGCAC CATGGAACAT TGGGCGAACT TTTACAAAAA CATCTTTGGT TTTACCGAAG TGCGCTACTT CGACATCAGC GGCGTACAAA CCGCACTGGT GTCTTACGCC CTGCGCTCAC CCGATGGCAG CTTCTGTATC CCAATTAACG AAGGTAAAGG CAACGATAAG AACCAAATCG ATGAATACCT GAAGGAATAC AATGGTCCAG GCGTACAACA CTTAGCCTTT AGAAGCCGTG ATATCGTTAA ATCCTTGGAT GCGATGGAAG GCAGCTCGAT TCAATGCTTG GATATTATTC CCGAATATTA CGACACCATT TTCGATAAAG TCCCGCAAGT GACCGAAAAC CGTGAGCGCA TCAAGCATCA CCAAATTTTG GTGGACGGCG ACGAATCAGG TTATTTATTA CAGATCTTCA CTAAGAACCT GTTTGGCCCG ATCTTTATCG AAATCATTCA ACGTAAGAAC AACTTAGGTT TTGGCGAAGG TAACTTTACC GCCCTGTTCC AATCGATTGA ACGTGATCAA ATGCGCCGCG GCGTGCTGTA A
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Protein sequence | MASELNPLGL LGIEFTEFAS PDSDFMHKVF IDFGFSLLKK AKNKDILYYK QNDINFLLNN EREGFSAEFA KSHGPAISSM GWRVEDASFA HRVAVERGAK AVADSAKDLP YPAIYGIGDS LIYFIDTFGA DNNIYATDFE DLSEPVITQE KGFVEVDHLT NNVYKGTMEH WANFYKNIFG FTEVRYFDIS GVQTALVSYA LRSPDGSFCI PINEGKGNDK NQIDEYLKEY NGPGVQHLAF RSRDIVKSLD AMEGSSIQCL DIIPEYYDTI FDKVPQVTEN RERIKHHQIL VDGDESGYLL QIFTKNLFGP IFIEIIQRKN NLGFGEGNFT ALFQSIERDQ MRRGVL
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