Gene Shewmr7_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2357 
Symbol 
ID4256963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2794089 
End bp2795801 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content48% 
IMG OID638123027 
ProductAMP-binding domain protein 
Protein accessionYP_738401 
Protein GI114047851 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0641132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0814981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTT CAACGACTCA AGCAACAAAT CCACTCAAAT ACAGTGAGTT CCGGGGAACA 
AATACCCCAG AACTTGTTGA AAAAACCATA GGACAGTACC TTAACGATAT CGCTAACACC
TATCCCGAAC AGTTAGCCGT TGTCGTTAAT CATCAAGATA TCCGCTGGAA TTACCGCCAA
TACCTTGCAC AAATTGATGC CTTGGCCACA GGCTTACTCA AACTGGGCAT AGGTCCTGGC
GATCGCGTGG GCATTTGGTC GCCCAATAAT ATCGAGTGGT GTCTAACCCA ATTTGCCACT
GCCAAAATTG GCGCCATCAT GGTGTGCATC AACCCCGCTT ATCGCCCTGA AGAATTGCAA
TATGCCCTGA CGAATGTGGG TTGCCGAGCT GTGATCTGCG CCGATAAATT CAAGTCCAGT
AACTATTTGC AAATGCTTTA CGAGTTAGCG CCAGAACTTA AGGTGTGCGC CGCAGGGCAA
TTGCAGGCTA AAGCATTGCC TGAGCTGGAG TTTGTGATCC GTATGGGGAC TGAAAAGTCT
CTCGGCATGT TGAACTTTGA TGATTTATTG CTTGAGGTGA CGCCAGATGA CAAGGCGGCG
CTCGATCGTA TCGCTGAGTC ACTTAGCCCT TATGATGCCA TCAATATCCA ATTTACCTCT
GGCACCACGG GTAGCCCAAA AGGCGCGACC TTATCGCACC ACAACATCCT GAATAATGGC
TACTTAGTGG CCGAGGCAAT GAAGTTTACC TGTAACGATA AACTCTGTAT TCCTGTTCCG
TTATACCATT GCTTTGGCAT GGTGCTAGGG AACTTGGTGT GCCTCGCTAA GGGCGCCGCG
GCGGTCTTTC CTGGGGATTC TTTCGATCCG CTGACAACTT TGGAAGTGAT AGAACGTGAA
CGCTGCACGG CACTGCACGG CGTACCGACC ATGTTTATTG CCGAGTTAGA GCATCCCGAG
TTTAAACGCT TTGACTTAAG CTCGCTGCGT ACTGGTGTTA TGGCGGGCGC AACTTGCCCA
GAAGAAGTGA TGCGCCGGGT ACAAAATCTG ATGTATATGC AGGAAGTGTT AATTGGCTAT
GGTCAAACCG AGTGCAGCCC GCTGAACCAC ATTACTGAAA TCGACTCACC AGTTGAGAAA
CGTGTGCTTA CCGTTGGCCG TGCTTTACCC CATACCGAAG TGAAAATCGT CGATGAATTT
GGTGAAGTGC TGCCTATCAA TACGCCAGGT GAAGTCTGTA GCCGTGGCTA TTGCATCATG
CAGTGTTACT GGAATGATCC CGAAAAAACG GCGGCGACTA TCGACAGTGA AGGCTGGCTG
CATTCTGGCG ATATCGGCCA AATGGATGAG CAAGGTTATG TGCAAATCGT TGGCCGTATT
AAAGATATGA TTATTCGCGG TGGCGAGAAT ATTTATCCCC GTGAAATTGA AGAGAAACTC
TATACCCATA AAGATGTGCA AGATGCGGCA GTGTTTGGGG TACACAGTGA TAAATATGGC
GAGGAAGTGT GCGCGTGGAT CAAGGTTCGC AGTGGCGCCA CGATTTCTGA GGAGGATATT
CGGCATTTCC TCACCGAAAA GTTCGCCTAC TTTAAAGTGC CTCGCTACAT CAAGTTTGTA
GAGCAATATC CCATGACAGT CACGGGCAAG ATCCAGAAAT TTAAAATGCG TGAGCTGATG
TATCAAGAGC TATATGAGGA TATTAATGCC TAA
 
Protein sequence
MSVSTTQATN PLKYSEFRGT NTPELVEKTI GQYLNDIANT YPEQLAVVVN HQDIRWNYRQ 
YLAQIDALAT GLLKLGIGPG DRVGIWSPNN IEWCLTQFAT AKIGAIMVCI NPAYRPEELQ
YALTNVGCRA VICADKFKSS NYLQMLYELA PELKVCAAGQ LQAKALPELE FVIRMGTEKS
LGMLNFDDLL LEVTPDDKAA LDRIAESLSP YDAINIQFTS GTTGSPKGAT LSHHNILNNG
YLVAEAMKFT CNDKLCIPVP LYHCFGMVLG NLVCLAKGAA AVFPGDSFDP LTTLEVIERE
RCTALHGVPT MFIAELEHPE FKRFDLSSLR TGVMAGATCP EEVMRRVQNL MYMQEVLIGY
GQTECSPLNH ITEIDSPVEK RVLTVGRALP HTEVKIVDEF GEVLPINTPG EVCSRGYCIM
QCYWNDPEKT AATIDSEGWL HSGDIGQMDE QGYVQIVGRI KDMIIRGGEN IYPREIEEKL
YTHKDVQDAA VFGVHSDKYG EEVCAWIKVR SGATISEEDI RHFLTEKFAY FKVPRYIKFV
EQYPMTVTGK IQKFKMRELM YQELYEDINA