Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2357 |
Symbol | |
ID | 4256963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2794089 |
End bp | 2795801 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123027 |
Product | AMP-binding domain protein |
Protein accession | YP_738401 |
Protein GI | 114047851 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0641132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0814981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTTT CAACGACTCA AGCAACAAAT CCACTCAAAT ACAGTGAGTT CCGGGGAACA AATACCCCAG AACTTGTTGA AAAAACCATA GGACAGTACC TTAACGATAT CGCTAACACC TATCCCGAAC AGTTAGCCGT TGTCGTTAAT CATCAAGATA TCCGCTGGAA TTACCGCCAA TACCTTGCAC AAATTGATGC CTTGGCCACA GGCTTACTCA AACTGGGCAT AGGTCCTGGC GATCGCGTGG GCATTTGGTC GCCCAATAAT ATCGAGTGGT GTCTAACCCA ATTTGCCACT GCCAAAATTG GCGCCATCAT GGTGTGCATC AACCCCGCTT ATCGCCCTGA AGAATTGCAA TATGCCCTGA CGAATGTGGG TTGCCGAGCT GTGATCTGCG CCGATAAATT CAAGTCCAGT AACTATTTGC AAATGCTTTA CGAGTTAGCG CCAGAACTTA AGGTGTGCGC CGCAGGGCAA TTGCAGGCTA AAGCATTGCC TGAGCTGGAG TTTGTGATCC GTATGGGGAC TGAAAAGTCT CTCGGCATGT TGAACTTTGA TGATTTATTG CTTGAGGTGA CGCCAGATGA CAAGGCGGCG CTCGATCGTA TCGCTGAGTC ACTTAGCCCT TATGATGCCA TCAATATCCA ATTTACCTCT GGCACCACGG GTAGCCCAAA AGGCGCGACC TTATCGCACC ACAACATCCT GAATAATGGC TACTTAGTGG CCGAGGCAAT GAAGTTTACC TGTAACGATA AACTCTGTAT TCCTGTTCCG TTATACCATT GCTTTGGCAT GGTGCTAGGG AACTTGGTGT GCCTCGCTAA GGGCGCCGCG GCGGTCTTTC CTGGGGATTC TTTCGATCCG CTGACAACTT TGGAAGTGAT AGAACGTGAA CGCTGCACGG CACTGCACGG CGTACCGACC ATGTTTATTG CCGAGTTAGA GCATCCCGAG TTTAAACGCT TTGACTTAAG CTCGCTGCGT ACTGGTGTTA TGGCGGGCGC AACTTGCCCA GAAGAAGTGA TGCGCCGGGT ACAAAATCTG ATGTATATGC AGGAAGTGTT AATTGGCTAT GGTCAAACCG AGTGCAGCCC GCTGAACCAC ATTACTGAAA TCGACTCACC AGTTGAGAAA CGTGTGCTTA CCGTTGGCCG TGCTTTACCC CATACCGAAG TGAAAATCGT CGATGAATTT GGTGAAGTGC TGCCTATCAA TACGCCAGGT GAAGTCTGTA GCCGTGGCTA TTGCATCATG CAGTGTTACT GGAATGATCC CGAAAAAACG GCGGCGACTA TCGACAGTGA AGGCTGGCTG CATTCTGGCG ATATCGGCCA AATGGATGAG CAAGGTTATG TGCAAATCGT TGGCCGTATT AAAGATATGA TTATTCGCGG TGGCGAGAAT ATTTATCCCC GTGAAATTGA AGAGAAACTC TATACCCATA AAGATGTGCA AGATGCGGCA GTGTTTGGGG TACACAGTGA TAAATATGGC GAGGAAGTGT GCGCGTGGAT CAAGGTTCGC AGTGGCGCCA CGATTTCTGA GGAGGATATT CGGCATTTCC TCACCGAAAA GTTCGCCTAC TTTAAAGTGC CTCGCTACAT CAAGTTTGTA GAGCAATATC CCATGACAGT CACGGGCAAG ATCCAGAAAT TTAAAATGCG TGAGCTGATG TATCAAGAGC TATATGAGGA TATTAATGCC TAA
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Protein sequence | MSVSTTQATN PLKYSEFRGT NTPELVEKTI GQYLNDIANT YPEQLAVVVN HQDIRWNYRQ YLAQIDALAT GLLKLGIGPG DRVGIWSPNN IEWCLTQFAT AKIGAIMVCI NPAYRPEELQ YALTNVGCRA VICADKFKSS NYLQMLYELA PELKVCAAGQ LQAKALPELE FVIRMGTEKS LGMLNFDDLL LEVTPDDKAA LDRIAESLSP YDAINIQFTS GTTGSPKGAT LSHHNILNNG YLVAEAMKFT CNDKLCIPVP LYHCFGMVLG NLVCLAKGAA AVFPGDSFDP LTTLEVIERE RCTALHGVPT MFIAELEHPE FKRFDLSSLR TGVMAGATCP EEVMRRVQNL MYMQEVLIGY GQTECSPLNH ITEIDSPVEK RVLTVGRALP HTEVKIVDEF GEVLPINTPG EVCSRGYCIM QCYWNDPEKT AATIDSEGWL HSGDIGQMDE QGYVQIVGRI KDMIIRGGEN IYPREIEEKL YTHKDVQDAA VFGVHSDKYG EEVCAWIKVR SGATISEEDI RHFLTEKFAY FKVPRYIKFV EQYPMTVTGK IQKFKMRELM YQELYEDINA
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