Gene Shewmr7_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2353 
Symbol 
ID4256959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2790789 
End bp2791625 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content49% 
IMG OID638123023 
Productalpha/beta hydrolase fold 
Protein accessionYP_738397 
Protein GI114047847 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.169914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGT GGGTATTACT CAGGGGCTTA ATGCGCGATC AACGCCATTG GAATGGCTTT 
GATCAGAGAT TAAGGCAAAG GGGCTGCACC GTTTTTACCC CTGACTTGCC CGGCAATGGG
ATCCTCACTC ACCAAGCCAG TCCTTTAACT ATCGCCGAAT ATGCCAGCTC GGTGTGGCAA
CAATTAGATG AGCAATTAGC GGGACAAGCC TTTTATCTGC TGGGCTTATC GATGGGCGGC
ATGCTCGCCA TGGAAATGGC TAAGCAGCGC CCCGAGCAGA TAAAACACGT ATTTGTGCTG
AATAGTAGCG CGGCTAACTT ATCACCTTGG TATCAGCGAT TTAATGTATT GAATGCCCTG
AGTGCTTGGC TCAAACGTTG CCGTGGTCGA CAGCTTAATC CTATCGAATC CACTATTGTC
CGCTTAACCA GTTTTCGACA TCGACGTGAT AGGGTCTTGA TTGCACGCTG GAGCCAATAT
CGGCAAGAGG CGAGCCCGAC GTTTATCAAC GGTTGCAGGC AATTGTGGGC AGCATTTCGC
TATGAATGTT CTATGTTTTT GCCTGTGCCT GTGAGTATTT TAGCGGGTGA TCGGGATGCG
TTAGTCAATA TCCAATCGAG CAGGGCGCTG GCACAGCATT TTAAGGTTGA TTTAGTTGTC
TTAGCCTATT GTGGCCACGA CATCACTATA GATGCTCCTG CTAAACTGGC GCATTATCTC
TTTGAAATCA TCAGTCCACC CCTAGGGGAA GCCAGTGAGC CTTTCGCTGA TTGTGGTGAC
TTGCTCGATG AGGAAACGGA CTTTCATGAG ACAAGATTAG TCATGAGGCA AGGTTAG
 
Protein sequence
MTTWVLLRGL MRDQRHWNGF DQRLRQRGCT VFTPDLPGNG ILTHQASPLT IAEYASSVWQ 
QLDEQLAGQA FYLLGLSMGG MLAMEMAKQR PEQIKHVFVL NSSAANLSPW YQRFNVLNAL
SAWLKRCRGR QLNPIESTIV RLTSFRHRRD RVLIARWSQY RQEASPTFIN GCRQLWAAFR
YECSMFLPVP VSILAGDRDA LVNIQSSRAL AQHFKVDLVV LAYCGHDITI DAPAKLAHYL
FEIISPPLGE ASEPFADCGD LLDEETDFHE TRLVMRQG