Gene Shewmr7_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2339 
Symbol 
ID4256893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2778167 
End bp2780095 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content51% 
IMG OID638123009 
Productpeptidase M1, membrane alanine aminopeptidase 
Protein accessionYP_738383 
Protein GI114047833 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.239765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0830864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAT CCCGTCGTAC CCTCATTAGC AGCGCACTCT TAATGCTGCT GCCATTAGTA 
CAGTATGCCA ATGCGGCCAA TACCTTACCG AATACCAGCC TGGCAAGCAC CACTGCAAGC
CAAATGCACT CTGTCACCGA TGAGCTGACC TTTGCCAATT ACCAGCAAGT GAGCATTCAT
CACATCGCAT TGGCATTAAA GGTAGATTTT GCGCAGCAGC AACTCGCGGG GGACGCGATG
CTCGAGCTGG ATTGGCATCA AGCAGGGAAA GTACTCGTGC TCGATACCCG TGACCTTACG
ATTAACAGCG TCAGCATGTT AGATGCAAAT GGCCAATGGC AATCCGTGCC CTTTAGTTTA
GGTGCGGCCG ATAAGGTCAA AGGCGCCGCG CTCACCATCA ATCTGCCTCA AGAACGAGTC
GCCAAGGTCA AAATTAATTA TCATACATCC AAGAACCCAT CTGGTATTCA ATGGCTTACT
CCAGAGCAAA CCCAAGGTAA GCAATGGCCA TTTATGTTTA GCCAGAGCCA AGCCATCCAT
GCCAGAAGCT GGATCCCGCT GCAAGATACG CCCGCAGTTC GCCAAACCTA CAGCGCCACC
GTCACAGCCA AGCAAGGCAT TAGTGTCGTC ATGAGTGCCG ACCGAGAGAG CGTGTCTGCG
ACGCAAACCC AATTCACTAT GCCGCAGGCG ATTCCAGCTT ACTTGATTGC CATTGCCGCA
GGACACCTGC AATTTGCCGC CTTAGACGAC ACCTCCGGCA TTTGGGCCGA GCCCGAAATG
CTCGCCAAGG CCAGCAAAGA ATTTGCCGAT ACGCCGGAGA TGATTGCCAT CGCCGCCAAA
CGTTACGGCG ATTACCGTTG GGGTCGTTAT GATTTACTGA TCCTTCCGCC AAGTTTTCCC
TTCGGCGGGA TGGAAAATCC GCGATTATCC TTTATTACTC CCACAGTCAT CGCGGGAGAT
AAAAGCCTAG TCAGTTTAAT CGCCCACGAG CTGGCCCATT CTTGGTCGGG CAATTTAGTC
ACTAACGCCA CCTGGCGCGA TCTCTGGCTT AACGAAGGTT TTACCACCTA TGTGGAAAAC
CGCATTATGG AAGATCTCTA TGGCCGAGAC CGCGCCCTAA TGGAGCAAAC CATTGGTTAC
TCTGAGCTAT TGGCCGAATT AGCCGAGTTG CCCGCCGGCG ATTCTGTACT GCATATTGAC
TTAGGCGAGC GTGATCCCGA CGATGCCTTT AGCGGCGTCC CCTATGTGAA AGGACAATTA
TTTTTGCGCT TCCTCGAGCA AAAATTTGGC CGTGAGCGGT TCGACACCTT TGTGAAAAGC
TACTTCGATC ACTTTGCGTT TCAAAGCATT ACCACGGAGC AGTTCCGCAA TTACCTCACG
CAGCAGTTAT TGCAAAAATA TCCCAATATC GTCAGCGAGT CCGAAGTGGA TACTTGGGTG
GAGGGACAAG GTTTACCCAG CTTTTTAGTG CCCCCCAACT CACACGCCTT CGATGATATC
GATGCCCAGC GCCAAGCGTG GTTAGAGGGC AAGCGTGCCG CAAGTGCCCT AAACACTCAG
GACTGGACTG TGCATCAATG GCTACGCTTT ATTAATGAAA TGCCAAGGCT AAATCTCACT
GAGCAGCAAT TAGCAGAGTT AGATAAGGCC TTTCATTTTA CTGGCACCCA CAATAATGAA
ATCGCCTTTG CTTGGTATGC CCTCGCCCTC GATAACGGTT ATTACAGTGT ATTGCCGGCA
CTGAAACAAC ATTTAACCGA GATTGGCCGG CGCAGGCTGA TTGTGCCTCT GTATCAAAAA
CTGGCGAGCA GCGAGCACTA TGATTGGGCA AAAACCGTTT ACTTGGCGGC CCGCAGTGGT
TACCACCCAC AGACCCAAGC GAGTCTCGAT ATGATGTTTA GTGATAAACC GATGGAGCAT
ATTCATTAA
 
Protein sequence
MFLSRRTLIS SALLMLLPLV QYANAANTLP NTSLASTTAS QMHSVTDELT FANYQQVSIH 
HIALALKVDF AQQQLAGDAM LELDWHQAGK VLVLDTRDLT INSVSMLDAN GQWQSVPFSL
GAADKVKGAA LTINLPQERV AKVKINYHTS KNPSGIQWLT PEQTQGKQWP FMFSQSQAIH
ARSWIPLQDT PAVRQTYSAT VTAKQGISVV MSADRESVSA TQTQFTMPQA IPAYLIAIAA
GHLQFAALDD TSGIWAEPEM LAKASKEFAD TPEMIAIAAK RYGDYRWGRY DLLILPPSFP
FGGMENPRLS FITPTVIAGD KSLVSLIAHE LAHSWSGNLV TNATWRDLWL NEGFTTYVEN
RIMEDLYGRD RALMEQTIGY SELLAELAEL PAGDSVLHID LGERDPDDAF SGVPYVKGQL
FLRFLEQKFG RERFDTFVKS YFDHFAFQSI TTEQFRNYLT QQLLQKYPNI VSESEVDTWV
EGQGLPSFLV PPNSHAFDDI DAQRQAWLEG KRAASALNTQ DWTVHQWLRF INEMPRLNLT
EQQLAELDKA FHFTGTHNNE IAFAWYALAL DNGYYSVLPA LKQHLTEIGR RRLIVPLYQK
LASSEHYDWA KTVYLAARSG YHPQTQASLD MMFSDKPMEH IH