Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2339 |
Symbol | |
ID | 4256893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2778167 |
End bp | 2780095 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123009 |
Product | peptidase M1, membrane alanine aminopeptidase |
Protein accession | YP_738383 |
Protein GI | 114047833 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.239765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0830864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTAT CCCGTCGTAC CCTCATTAGC AGCGCACTCT TAATGCTGCT GCCATTAGTA CAGTATGCCA ATGCGGCCAA TACCTTACCG AATACCAGCC TGGCAAGCAC CACTGCAAGC CAAATGCACT CTGTCACCGA TGAGCTGACC TTTGCCAATT ACCAGCAAGT GAGCATTCAT CACATCGCAT TGGCATTAAA GGTAGATTTT GCGCAGCAGC AACTCGCGGG GGACGCGATG CTCGAGCTGG ATTGGCATCA AGCAGGGAAA GTACTCGTGC TCGATACCCG TGACCTTACG ATTAACAGCG TCAGCATGTT AGATGCAAAT GGCCAATGGC AATCCGTGCC CTTTAGTTTA GGTGCGGCCG ATAAGGTCAA AGGCGCCGCG CTCACCATCA ATCTGCCTCA AGAACGAGTC GCCAAGGTCA AAATTAATTA TCATACATCC AAGAACCCAT CTGGTATTCA ATGGCTTACT CCAGAGCAAA CCCAAGGTAA GCAATGGCCA TTTATGTTTA GCCAGAGCCA AGCCATCCAT GCCAGAAGCT GGATCCCGCT GCAAGATACG CCCGCAGTTC GCCAAACCTA CAGCGCCACC GTCACAGCCA AGCAAGGCAT TAGTGTCGTC ATGAGTGCCG ACCGAGAGAG CGTGTCTGCG ACGCAAACCC AATTCACTAT GCCGCAGGCG ATTCCAGCTT ACTTGATTGC CATTGCCGCA GGACACCTGC AATTTGCCGC CTTAGACGAC ACCTCCGGCA TTTGGGCCGA GCCCGAAATG CTCGCCAAGG CCAGCAAAGA ATTTGCCGAT ACGCCGGAGA TGATTGCCAT CGCCGCCAAA CGTTACGGCG ATTACCGTTG GGGTCGTTAT GATTTACTGA TCCTTCCGCC AAGTTTTCCC TTCGGCGGGA TGGAAAATCC GCGATTATCC TTTATTACTC CCACAGTCAT CGCGGGAGAT AAAAGCCTAG TCAGTTTAAT CGCCCACGAG CTGGCCCATT CTTGGTCGGG CAATTTAGTC ACTAACGCCA CCTGGCGCGA TCTCTGGCTT AACGAAGGTT TTACCACCTA TGTGGAAAAC CGCATTATGG AAGATCTCTA TGGCCGAGAC CGCGCCCTAA TGGAGCAAAC CATTGGTTAC TCTGAGCTAT TGGCCGAATT AGCCGAGTTG CCCGCCGGCG ATTCTGTACT GCATATTGAC TTAGGCGAGC GTGATCCCGA CGATGCCTTT AGCGGCGTCC CCTATGTGAA AGGACAATTA TTTTTGCGCT TCCTCGAGCA AAAATTTGGC CGTGAGCGGT TCGACACCTT TGTGAAAAGC TACTTCGATC ACTTTGCGTT TCAAAGCATT ACCACGGAGC AGTTCCGCAA TTACCTCACG CAGCAGTTAT TGCAAAAATA TCCCAATATC GTCAGCGAGT CCGAAGTGGA TACTTGGGTG GAGGGACAAG GTTTACCCAG CTTTTTAGTG CCCCCCAACT CACACGCCTT CGATGATATC GATGCCCAGC GCCAAGCGTG GTTAGAGGGC AAGCGTGCCG CAAGTGCCCT AAACACTCAG GACTGGACTG TGCATCAATG GCTACGCTTT ATTAATGAAA TGCCAAGGCT AAATCTCACT GAGCAGCAAT TAGCAGAGTT AGATAAGGCC TTTCATTTTA CTGGCACCCA CAATAATGAA ATCGCCTTTG CTTGGTATGC CCTCGCCCTC GATAACGGTT ATTACAGTGT ATTGCCGGCA CTGAAACAAC ATTTAACCGA GATTGGCCGG CGCAGGCTGA TTGTGCCTCT GTATCAAAAA CTGGCGAGCA GCGAGCACTA TGATTGGGCA AAAACCGTTT ACTTGGCGGC CCGCAGTGGT TACCACCCAC AGACCCAAGC GAGTCTCGAT ATGATGTTTA GTGATAAACC GATGGAGCAT ATTCATTAA
|
Protein sequence | MFLSRRTLIS SALLMLLPLV QYANAANTLP NTSLASTTAS QMHSVTDELT FANYQQVSIH HIALALKVDF AQQQLAGDAM LELDWHQAGK VLVLDTRDLT INSVSMLDAN GQWQSVPFSL GAADKVKGAA LTINLPQERV AKVKINYHTS KNPSGIQWLT PEQTQGKQWP FMFSQSQAIH ARSWIPLQDT PAVRQTYSAT VTAKQGISVV MSADRESVSA TQTQFTMPQA IPAYLIAIAA GHLQFAALDD TSGIWAEPEM LAKASKEFAD TPEMIAIAAK RYGDYRWGRY DLLILPPSFP FGGMENPRLS FITPTVIAGD KSLVSLIAHE LAHSWSGNLV TNATWRDLWL NEGFTTYVEN RIMEDLYGRD RALMEQTIGY SELLAELAEL PAGDSVLHID LGERDPDDAF SGVPYVKGQL FLRFLEQKFG RERFDTFVKS YFDHFAFQSI TTEQFRNYLT QQLLQKYPNI VSESEVDTWV EGQGLPSFLV PPNSHAFDDI DAQRQAWLEG KRAASALNTQ DWTVHQWLRF INEMPRLNLT EQQLAELDKA FHFTGTHNNE IAFAWYALAL DNGYYSVLPA LKQHLTEIGR RRLIVPLYQK LASSEHYDWA KTVYLAARSG YHPQTQASLD MMFSDKPMEH IH
|
| |