| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2333 |
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| Symbol | |
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| ID | 4256887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2769866 |
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| End bp | 2770813 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123003 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_738377 |
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| Protein GI | 114047827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.108163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0297059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTAA TTTTGGCTCC GATGGAAGGC GTGGTTGACG ACTTAATGCG AGATATTTTG
TCTTCAATTA ACCCCTACGA TTTGCTCGTC ACCGAATTTG TGCGCGTGGT TGACCAACTC
TTACCCGAAA AAGTGTTTCT CAAACTCTGC CCAGAACTGC TTAATGACGG CTTTACCCCT
TCTGGCACGC CGGTTCGTGT ACAGCTTTTA GGGCAAGAGC CCAACTGCAT GGCCGAAAAC
GCGATGCGCG CGATTGAGCT TGGCTCCCAC GGCGTCGATG CAAACTTTGG TTGCCCCGCT
AAGATGGTGA ACCGCAGTAA TGGCGGCGCG GTGTTACTGC AATACCCTAA TACGATTCAC
GATATTGTCC GTGCCATGCG CCAAGCCGTG CCCGCCGAGC ATCCGGTGAC GGCGAAAATT
CGGTTAGGCT ACGAAGACAA ATCCCTGTTT ATGGAAAATG CGCTGGCCGT TTATGAAGCG
GGCGCGACTG AGCTGGCTAT CCATGCCCGC AGTAAGGTCG ATGGTTACAA ACCGCCCGCC
TACTGGGAAT ACATCACCGA AGTGCGCGAG CGTTTGCCCA TTCCTGTGAT TGCTAATGGA
GAGATTTGGA ACCGCGAAGA TGCCGAGCGT TGTATGGCGG TGACGGGCTG CGACAGCATT
ATGATTGGCC GCGGCGCGAT TTCGCTGCCC AATCTTGCCG ACACGATTAA GACTGGCGCG
GCGCCTTACA GCTGGGCCGA CACCTTAGGC TTGATGCTAA GCTACACCCA ACGTGAGCTA
AGCGGCCGTA AGAGTGATTA TTATCCGGCG CGAATTAAGC AGTGGTTTAG TTATTTGAAT
CGCCAATACC CCGAGGCGGA CACCCTGTTT AGGGAGCTAC GCATCTATAA AACCACAGAG
GAAATTGTGC GAGTGCTAGA AGAGGCGCAG CTACGCCTTA ATCAATAA
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| Protein sequence | MRVILAPMEG VVDDLMRDIL SSINPYDLLV TEFVRVVDQL LPEKVFLKLC PELLNDGFTP
SGTPVRVQLL GQEPNCMAEN AMRAIELGSH GVDANFGCPA KMVNRSNGGA VLLQYPNTIH
DIVRAMRQAV PAEHPVTAKI RLGYEDKSLF MENALAVYEA GATELAIHAR SKVDGYKPPA
YWEYITEVRE RLPIPVIANG EIWNREDAER CMAVTGCDSI MIGRGAISLP NLADTIKTGA
APYSWADTLG LMLSYTQREL SGRKSDYYPA RIKQWFSYLN RQYPEADTLF RELRIYKTTE
EIVRVLEEAQ LRLNQ
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