| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2301 |
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| Symbol | |
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| ID | 4256472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2726219 |
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| End bp | 2727637 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638122971 |
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| Product | nitrite transporter |
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| Protein accession | YP_738346 |
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| Protein GI | 114047796 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.123404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAT CTCAAACCAC CCCAAAATCA CGTCAGGGAG TCATACATGA TTGGCACCCA
GATGATAAAA AATTTTGGCT ACTCAAAGGT AGTAAAATTG CGAGAAAAAA CTTAATAATT
TCTATATGTT GTCTACTACT TTCATTTTCT GTTTGGATGT TATTTAGTGC GGTTGCTGTC
AATCTTAATA AAGTGGGTTT TAACTTTACT ACTGACCAAC TCTTTTTATT AACGGCTTTA
CCTTCGGTAT CAGGTGCATT ATTGCGCGTA CCTTATTCGT TTGTCATACC CATTTTTGGA
GGCCGCCGTT GGACAGCTTT CAGTACCGCC TTGCTAATGA TTCCGAGTCT TTGGTTAGGA
TTTGCTGTGC AAGATAATAC AACCCCCTTC AGCATATTTG TCATTATTGC ACTGTTATGT
GGGTTTGGTG GTGCCAATTT TGCTTCAAGT ATGGCCAATA TTAGTTTTTT CTATCCTAAG
GATAAACAAG GTAGTGCATT AGGGTTAAAT GGAGGATTAG GAAATCTAGG TGTCAGCGTT
ATGCAACTAT TCGTCCCCCT GATCATCTCA ATAGGAATCT TCAATATCTT TGGAGAAAGT
GCTGATATTC AAAGCAATGG CAACACCATT TGGTTACAAA ATGCCGCTTG GGTTTGGCTT
CCCTTCTTAT TAATCAGTAC TCTGATGGCT TGGTTCGGAA TGAATGATAT CGCCGCAGCT
AAAGCATCAA TCAAACAACA ACTTCCTGTA TTAAAGCAAG GTCATCTGTG GATTTTGAGT
TTACTGTATC TCGCTACATT TGGATCATTC ATCGGCTTTT CAGCAGGCTT TGCGATGCTA
ACAAGTACCC AATTCCCAAA TATCGATATT TTGCATTTCG CTTTTTTAGG CCCTTTAGTG
GGTGCATTAA TGCGCCCTGT TGGTGGCATT TTATCCGATA AATGGGGTGG TATTAATGTC
ACCATGGTAA ATTTTATGTT AATGGGACTC TTTGCCACAT TACTATTTTT TACCCTTCCC
ACAGCAGAAA CCGATGGGCA TTTTAATGCT TTCTTCATAT TATTTTTGGC GCTTTTTGCT
ACCGCAGGAT TAGGCAGTGG CTCAACATTT CAAATGATTT CAGTCGTTTT TAGACGATTA
ATCGTGACAA GTGTTAAAGC AAAAGGGGGA AGTGACGCCC AGGCCCAAGT AAAAGCAGCA
ACAGATACTG CTGCCGCATT AGGGTTTATC TCAGCCATAG GTGCTATTGG AGGTTTTTTC
ATTCCCAAGG CATTCGGAAC ATCATTAGCA TTAACCGGTT CTCCCGTTAA TGCCATGAAG
GTCTTTATCT TTTGTTATAT TGCTTGCCTT TTTATCACAT GGTTGATTTA TGGGCGAAAA
ATTAAAACTA TGGCCACTGA AAAGATTTCA ACTGTTTAG
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| Protein sequence | MALSQTTPKS RQGVIHDWHP DDKKFWLLKG SKIARKNLII SICCLLLSFS VWMLFSAVAV
NLNKVGFNFT TDQLFLLTAL PSVSGALLRV PYSFVIPIFG GRRWTAFSTA LLMIPSLWLG
FAVQDNTTPF SIFVIIALLC GFGGANFASS MANISFFYPK DKQGSALGLN GGLGNLGVSV
MQLFVPLIIS IGIFNIFGES ADIQSNGNTI WLQNAAWVWL PFLLISTLMA WFGMNDIAAA
KASIKQQLPV LKQGHLWILS LLYLATFGSF IGFSAGFAML TSTQFPNIDI LHFAFLGPLV
GALMRPVGGI LSDKWGGINV TMVNFMLMGL FATLLFFTLP TAETDGHFNA FFILFLALFA
TAGLGSGSTF QMISVVFRRL IVTSVKAKGG SDAQAQVKAA TDTAAALGFI SAIGAIGGFF
IPKAFGTSLA LTGSPVNAMK VFIFCYIACL FITWLIYGRK IKTMATEKIS TV
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