| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2298 |
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| Symbol | |
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| ID | 4256469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2722248 |
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| End bp | 2723186 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122968 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_738343 |
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| Protein GI | 114047793 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.44184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.652684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA TAGCCCCACT ACACGCCGAT ACGGACCATA ATCAAGCCAT TGAGACTATC
CTCAATAGCC TCGATGTGTT GGTCTATGTA TCAGATTTAA ATACCTATGA TTTGCTCTAT
TTAAATAGTT ATGGCGCATC AGTTTGGGGG GATGCGAAAG GAAAAAAGTG CTATCAAGTT
CTGCAATCGG CACAAAACTC CCCTTGCCAA TTTTGCACTA ATCCTAAACT AGTGGACTCG
GATGGAAATC CTACGGGCGT CCATGTATGG GAGTTTCAAA ATACGCAAAA TGGCCGTTGG
TATCAATGTC GAGATCAAGC CATTCATTGG ACTGATGGCC GATTAGTCAG AATTGAAATC
GCCACCGATA TCACCGAACG CAAACAGATG GAGCAAGCAC TAATAGAGGC CAAATCTACG
GCAGAGCGCC TTGCCCATAC CGACGAACTG ACCCAGCTCT ATAATCGCCG GGCTTTTTTC
AATCTCGGTC GTCAAATCGC GCAGCAAGCC CAACAACCGC TGTCGTTTAT TATGTTTGAT
ATTGACCATT TCAAGCGGAT TAACGACCAT TGGGGCCACG CAATCGGTGA TGCGGCGCTT
ATCCATATCG CAAGATTGAC GCAAACTAAA CTGAGTTCGA GTGATATTCT CGCCCGTTTA
GGGGGTGAAG AGTTTGGCCT GATTTTACCC AACACTCACC ATGAGCAAGC ATGGCAAGTT
GCGGAAGCGA TTCGCCATGG GTTTGATACA CAGCCGCTGC ACCTTGATGG ACATAGCATC
CGCTGCACCG CAAGCTTTGG CATATCATCC ATAATCTTAC CAAAAATCAA TCACCTCGAT
GAGGCACAAA CTCTCTTGGA GAGCTTATTC AATAATGCCG ATCAGGCCAT GATGCAAGCT
AAACGCGCAG GTAGGAATCA AGTCTGCCAT GCGGCATAA
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| Protein sequence | MTQIAPLHAD TDHNQAIETI LNSLDVLVYV SDLNTYDLLY LNSYGASVWG DAKGKKCYQV
LQSAQNSPCQ FCTNPKLVDS DGNPTGVHVW EFQNTQNGRW YQCRDQAIHW TDGRLVRIEI
ATDITERKQM EQALIEAKST AERLAHTDEL TQLYNRRAFF NLGRQIAQQA QQPLSFIMFD
IDHFKRINDH WGHAIGDAAL IHIARLTQTK LSSSDILARL GGEEFGLILP NTHHEQAWQV
AEAIRHGFDT QPLHLDGHSI RCTASFGISS IILPKINHLD EAQTLLESLF NNADQAMMQA
KRAGRNQVCH AA
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