| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2281 |
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| Symbol | |
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| ID | 4257131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2702817 |
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| End bp | 2704016 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122951 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_738326 |
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| Protein GI | 114047776 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA AACATCAGCT AGCCACCCAA ATCGTCAGCG TCGGTCGAGA TAAAAAATGG
ACCAAGGGCG TGATTAACCC GCCCGTATTT CGCGCATCGA CTATCGTCTT CGACACAATG
GAAGATATGC GTCATGCCGC CAAAAACAAA ACCAATGGCG AAATGTTTTA TGGCCGCCGT
GGCACCCCAA CCCATTTTGC GTTTCAGGCT GCGATCAGTG AGCTCGAAGG TGGCGCAGGT
ACGGCGCTGT ATCCCTCAGG TGCAGCGGCG ATTAGCGCGG CTTTGTTATC GTTTTTGCAG
GCGGGCGATC ACCTGCTGAT GGTCGACAGT GTGTACGAGC CAACCCGCGA TCTCTGTAGC
CATATTCTGG CGGGCTTTAA TATTGAGACC ACCTATTACG ATCCCCTGAT TGGTGAAGGT
ATTCGCGAGC TTATCCGCCC CAATACTAAG GTGCTGTTTT TGGAGTCTCC CGGCTCCATC
ACCATGGAAG TGCAAGACGT CCCGACCCTA TGCCGTATCG CCCATGAACA TGGATTAGTG
ACCATTCTCG ACAACACTTG GGCCTCGCCA ATCAATAGCA AGCCCTTCGA GATGGGTGTC
GATGTGTCGA TTCAAGCTGC GACCAAATAT ATCGTCGGTC ACTCTGATGT GATGATTGGC
ACCGCGACCG CTAACGAAAA GCACTGGCCG CAGCTGCGTG AACGCAGTTA TTTATTGGGG
CAAACGACTT CTCCCGATGA TGTGTATCTC GCCACGCGCG GATTACGCAC CCTAGGCGTG
CGCATGGCGC AGCATGAGAA AAATGCCCTT AAAGTGGCAA ACTGGTTGAA AACTCGCCCC
GAGGTTGACC ATTTACGTCA CCCCGCCTTT GATACCTGCC CAGGACATGA GTTCTTTAAA
CGCGACTTTA GCGCCGCCAA CGGTCTGTTC TCCTTCGTGT TAAAGCAAGG GGATCAGGAG
GCGGTGACCG CGCTCGTTGA AAATATGCAA CATTTTAAAA TGGGCTTTTC TTGGGGCGGT
TATGAGAGTC TGATCCTAGG AATTTTCGGG ATTGAAAAAA TCCGCAGTGC TACTCAGTGG
GATGCAAGCA AGCCGTTGAT CCGTGTGCAT ATTGGCCTCG AAGATCCCGA TGATTTAATT
GCCGATCTCA GCGCAGGCTT CGATCGCTTT AATGCCGTAC TCGCAGCCAA GACTAAATAA
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| Protein sequence | MTDKHQLATQ IVSVGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR
GTPTHFAFQA AISELEGGAG TALYPSGAAA ISAALLSFLQ AGDHLLMVDS VYEPTRDLCS
HILAGFNIET TYYDPLIGEG IRELIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV
TILDNTWASP INSKPFEMGV DVSIQAATKY IVGHSDVMIG TATANEKHWP QLRERSYLLG
QTTSPDDVYL ATRGLRTLGV RMAQHEKNAL KVANWLKTRP EVDHLRHPAF DTCPGHEFFK
RDFSAANGLF SFVLKQGDQE AVTALVENMQ HFKMGFSWGG YESLILGIFG IEKIRSATQW
DASKPLIRVH IGLEDPDDLI ADLSAGFDRF NAVLAAKTK
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