| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2277 |
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| Symbol | |
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| ID | 4257127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2696455 |
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| End bp | 2698722 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122947 |
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| Product | vault protein inter-alpha-trypsin subunit |
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| Protein accession | YP_738322 |
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| Protein GI | 114047772 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0645539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAG GGAAAAGGGT AAAAGAAGTT TGTCAAACAC TGGCGATGCT AGTGATCGGC
GCCTCCATTT GTTGGGGGCT ACCATTTGCG GTGTTAGCTT CACCGAACAG TGTGGGTACC
TTATCGGCGC CACAAAATAT TGCGGCGACC TTCGATGAAC ACACGGCGAG CACATTGCCA
GCGTTTAGTT TCGACGATGT CACCCAAGGG ATGCTGGTGT ATCAAACCGC CAGCGGCCGT
TTAATGCCGT CATTACCCGT GGACACGCAA GTGTCGATGC AGGTCTCGGG GCTGACTAAT
AGGGTGAGCG TGAAGCAGGT CTTCAGTAAC CAAACGGGAT TTGTGCTCAA TGGCCGTTAT
CTGTTCCCTT TACCCAATGA GGCGGCGGTG GACTCACTGC GTTTGCACAT TGGTGAGCGG
ATCATCGAAG GTCAAATTCA CCCAAAACAG CAAGCAAAAC AGATTTTTGA GCAGGCTAAA
GCCGAAGGGA AACGCGCCAG TCTAGTCAGC CAAGAACGGC CCAATATGTT CACGACCGAA
GTCGCTAACC TCGCTCCCGA TGAGGAGTTG GTGGTCGAAA TCAGCTATCA AGAAACCATT
CATTATGAAG ATGGTCTCTT TAGCCTACGT TTTCCGTTGG TGGTGGCGCC GCGCTATATC
CCAGGGTTAA CGCTAGGCGG AAACAATGAT GAGCGCGTGA CCAGCAGCCA AGTCTTCGAT
GCCGACCGAA TTATTGCCCC GATCCGCGAT GCCAGTAGTG AGACGGATCC CGTGCTTAAG
GCCGATATTA AGGTCAAGCT CGGTGAAGGC GTGGACAAAT CCGCCGTGGT GAGTCCGTAT
CATCCCATTA GGATTGATGA AAAACAGGGC CAACTGACGG CGGCCTTGGC CAATCGCGTG
CCCGCCAATC GTGACTTTGT GCTGCAATGG CGTCTTAAGC AGGGCACCAG TCCCGTGGCT
TGGGTATTCA ACCAAACGGG CAAAACCCAT ACGACGCAGG ACGATAATGC GAGTGCGGAT
ACAGGTCCAA CTGGTAATAG TAGCAATACA GATAACTACA GCTTAGTGAT GGTCCTGCCG
CCCAAAGTCG AGGCCAGTGA ACAACTGAAC TTGCCCCGTG AGCTTATTTT AGTGATTGAT
ACTTCGGGGT CGATGGCGGG AGATTCCATC ATTCAGGCGA AAAATGCCCT GCGTTATGCG
CTGCGCGGTC TAAGGCCACA GGACAGTTTT AACATTATCG AATTTAATTC CGATGTGTCT
TTACTATCAC CAACACCACT GCCAGCGACC GCGACTAATC TCGCCATGGC ACGTCAGTTT
GTGAATCGTT TGCAGGCCGA TGGCGGCACC GAAATGGCGC AGGCCTTAAA TGCCGCGCTG
CCAAGACAGG CGTTTAATAC CGCTTCTGGT GAGGATAAGT CGCTAAGACA AGTGATCTTT
ATGACCGATG GCTCCGTCGG CAATGAGTCG GCGTTATTTG AGTTAATCCG CAATCAAATC
GGCGACAACC GTCTTTTCAC CGTTGGCATT GGCTCGGCGC CAAACTCGCA TTTTATGCAG
CGTGCGGCTG AACTTGGGCG CGGTACTTTT ACTTACATTG GTGATGTGGA TGAAGTGGAG
CAAAAAATCA GCCAGTTGCT AGCCAAAATC CAGTATCCGG TACTGACCGA TTTGCAGGTG
CGCTTTGACG ATGGTTCTGT GCCTGATTAC TGGCCCGCGC CTATACCCGA TCTTTACCGT
GGTGAGCCAG TATTGATCAG CCTAAAGCGC CACCCTCGTG AGCCTCAGGA ACTGGTGATC
TCCGGTCGTC AGGGGCATAA AAACTGGCAA CAGTCGCTAT CTTTGCAAGC CAATGATGCA
AGCAATCCTG CAACTGATGT ATCGCAGCCC GTGGCGGGAC TCGATTTACT CTGGGCGCGC
AAACAGATTG CGGCCTTAGA GCTGAGTAAA AACGGCGCTA ACGATGACAA GATCAAACAA
CAGGTCACGG CGCTGTCGAT GAACTATCAC TTAGTCAGCC CCTATACCAG TTTGGTTGCG
GTGGATTTAA CCCCCATCAC CAGCAATGCC ATGAGCCGCG ATGCGGTGGT GCGCCAGCAT
TTACCCTTGG GTTGGCAGCC AATGGGCGTT TTGCCACAAA CATCGACCTC GAGCCGTTTC
GACATGCTCT TAGGGGGCAG CGTGTTACTG CTTGCCTTGA TGTTGGCGCT GTCGATTCGT
CGCCAGCAGC GGCAGCAACG CGCGCTGTCA TTAGCGCTGA ACGGCTGA
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| Protein sequence | MITGKRVKEV CQTLAMLVIG ASICWGLPFA VLASPNSVGT LSAPQNIAAT FDEHTASTLP
AFSFDDVTQG MLVYQTASGR LMPSLPVDTQ VSMQVSGLTN RVSVKQVFSN QTGFVLNGRY
LFPLPNEAAV DSLRLHIGER IIEGQIHPKQ QAKQIFEQAK AEGKRASLVS QERPNMFTTE
VANLAPDEEL VVEISYQETI HYEDGLFSLR FPLVVAPRYI PGLTLGGNND ERVTSSQVFD
ADRIIAPIRD ASSETDPVLK ADIKVKLGEG VDKSAVVSPY HPIRIDEKQG QLTAALANRV
PANRDFVLQW RLKQGTSPVA WVFNQTGKTH TTQDDNASAD TGPTGNSSNT DNYSLVMVLP
PKVEASEQLN LPRELILVID TSGSMAGDSI IQAKNALRYA LRGLRPQDSF NIIEFNSDVS
LLSPTPLPAT ATNLAMARQF VNRLQADGGT EMAQALNAAL PRQAFNTASG EDKSLRQVIF
MTDGSVGNES ALFELIRNQI GDNRLFTVGI GSAPNSHFMQ RAAELGRGTF TYIGDVDEVE
QKISQLLAKI QYPVLTDLQV RFDDGSVPDY WPAPIPDLYR GEPVLISLKR HPREPQELVI
SGRQGHKNWQ QSLSLQANDA SNPATDVSQP VAGLDLLWAR KQIAALELSK NGANDDKIKQ
QVTALSMNYH LVSPYTSLVA VDLTPITSNA MSRDAVVRQH LPLGWQPMGV LPQTSTSSRF
DMLLGGSVLL LALMLALSIR RQQRQQRALS LALNG
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