| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2276 |
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| Symbol | |
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| ID | 4257126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2695762 |
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| End bp | 2696403 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122946 |
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| Product | sortase family protein |
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| Protein accession | YP_738321 |
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| Protein GI | 114047771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0587007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGATTGG TATTACTCGG CATCACGTTG TTTGGAAAAG GATTCTATAT GCAAGCGAAA
GCACACTTTG CCCAATATTT GATTGAACAA GCCTGGGCTA AAACCTTAAT CGATGGTCAG
TCCCATAAAC CTTGGTCCTG GGCTGATACC TATCCCGTGG CTAAGCTCTC CATCGAGCAG
GCCAAAAGAC CGAATCACTT CGATGGTCCT GCATCCAACG ACAGCTTATA TGTGCTGGCG
GGCGCATCTG GTCGTAATTT GGCCTTCGGG CCAGCCTTAG TGCTATCGAG TGCTCCCGCT
GGCGCGCAAG GTAATACTGT GATTGCTGGG CACAGGGATA CGCATTTTGC GATGTTAAAT
GGCATCAGTG TTGGACGCCG CTTGGCGCTG CAAACCGCGA CGGGCAAAGA AATTGTTTAC
CAAGTGGTGG CGACCGAAGT GGTGCACGAA TCGCAAACTG AGTTGATGGC GCCAAGTGAG
GATAATCGTT TAACGCTAAT CACTTGTTAC CCCTTTGATG TGCTGCAAGG CGGGGCCGAA
CTGCGTTTTG TGGTGCAGGC TATTCCTGTC CTGCCAGAGA ATGCTGCCGC GCAATCCGTA
GAAACGACGG TCAATACGAC TGCGGCACAA AAAGTGGCTT AG
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| Protein sequence | MGLVLLGITL FGKGFYMQAK AHFAQYLIEQ AWAKTLIDGQ SHKPWSWADT YPVAKLSIEQ
AKRPNHFDGP ASNDSLYVLA GASGRNLAFG PALVLSSAPA GAQGNTVIAG HRDTHFAMLN
GISVGRRLAL QTATGKEIVY QVVATEVVHE SQTELMAPSE DNRLTLITCY PFDVLQGGAE
LRFVVQAIPV LPENAAAQSV ETTVNTTAAQ KVA
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