| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2273 |
|---|
| Symbol | |
|---|
| ID | 4256040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2691848 |
|---|
| End bp | 2692771 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638122943 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738318 |
|---|
| Protein GI | 114047768 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.308758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTA AGTCTGATGT TATCGCTGGA AATAATAAGA AGAATACTGG AGTAACGTTG
ATTTCTACTC GTCTAACACC CCTAGTCATC GCCCTACTCG GCAGCAGCCC TGTGCTGGCG
GGCGAATTAA GCCTTGAACT AGGGGGATTT TATTCACAGT CTGATACCAA TATGGAAGTG
ACTAACCCTA TATCAGGGAA TAACTTCACC TTAGATTATG AATCCGATCT GCAACTGGCC
GAGAACGAGT TTTTACCCTT TGTTGAGTTA AATTATCACT TTAACGAACG GCATAATATT
TACCTCGACT GGAAACAACT CCACCGCAGC GCTGAAACTC AAGCCTTAAG TAAACCCTTT
CAAATCGAAA TCAACGATAC CATCTACGAT ATTAAGGCTG GGGGCAAACT CAGCTCCACC
TTAAATATTG ATATATTACG TGTCGGTTAC GGTTATGATG CTCTCCAAGG CAGCAATTAC
GATGTTGGCT TTTCCCTTGG TTTGCACACT ATGTTTATCA AAACGGGATT TGAAGGCGTT
ATCGGCGTCT GTCATCCCTC TGAGTTGCTC AACAATGTCT GTGGCAGCCA AGCAATCCCT
CGCATCGTCG ATGAAAATGT CACCGCCCCC CTGCCAGATT TTGGCTTATA TGCCAACTAT
GAGTTTATCC CTGGCTGGAA ACTGGCAACC CATGCCCAGT ACTTCTACAT CAAACTCAAT
GATGTAAAAG GTGAGCTTGT GGATGTCAAA CTCGGCATCG ATGCCAATAT TACCGAAAAT
TGGCGCATGA GCGTGGCCTA TAACTACTAC AAAGTCGATG TGGATATCGC CCAAAAATCA
CCGAATAAAG ATACCCAAAT CGCCGACTAT AACATTTACT ACAGTTTTAT CGGCCCAATG
CTTTCGGTGA GTTATACATT CTAA
|
|---|
| Protein sequence | MALKSDVIAG NNKKNTGVTL ISTRLTPLVI ALLGSSPVLA GELSLELGGF YSQSDTNMEV
TNPISGNNFT LDYESDLQLA ENEFLPFVEL NYHFNERHNI YLDWKQLHRS AETQALSKPF
QIEINDTIYD IKAGGKLSST LNIDILRVGY GYDALQGSNY DVGFSLGLHT MFIKTGFEGV
IGVCHPSELL NNVCGSQAIP RIVDENVTAP LPDFGLYANY EFIPGWKLAT HAQYFYIKLN
DVKGELVDVK LGIDANITEN WRMSVAYNYY KVDVDIAQKS PNKDTQIADY NIYYSFIGPM
LSVSYTF
|
|---|
| |