Gene Shewmr7_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2266 
Symbol 
ID4256033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2685811 
End bp2686314 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID638122936 
Productprotein tyrosine phosphatase 
Protein accessionYP_738311 
Protein GI114047761 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGAAG ATAAAGCGTT AGCAAAAGAT CAGCATGTAC GACGCATCTT AATGGTCTGT 
ATGGGCAATA TTTGTCGTTC GCCCACCGCC GAGGCCGTTT GCCGCGCTAA AATTCGCGAG
CGCCGTCTTA ATATCGACGT CGATTCGGCG GGCACTATTG GTTATCACCA AGGGGGCAAC
CCGGACAGTC GCTCGATGGC GGCAGGTAAA AAACGCGGTT TGAGTTTCGA CGGCATGCGA
GCAAGACAAG TGATTGATGC CGATTTTGAG CATTTCGATC TTATTTTAGC GGCTGATAAT
AGCAACCTCG CGGATTTACG CCGTCGTTGC CCACCCGAAT ATCAATACAA ATTAAAGCTG
ATGTTGTCTT TTGGTGATTG CGACACGGAT GAAGTCCCCG ATCCCTATTA CGGCGGTACG
CAAGGATTCG AATTAGTCCT CGATCTACTC GAACAGAGTA TTGATGCATT ATTAGATAAG
TTAGCCAGAA AAACACATGG GTAA
 
Protein sequence
MLEDKALAKD QHVRRILMVC MGNICRSPTA EAVCRAKIRE RRLNIDVDSA GTIGYHQGGN 
PDSRSMAAGK KRGLSFDGMR ARQVIDADFE HFDLILAADN SNLADLRRRC PPEYQYKLKL
MLSFGDCDTD EVPDPYYGGT QGFELVLDLL EQSIDALLDK LARKTHG