Gene Shewmr7_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2260 
Symbol 
ID4256027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2679036 
End bp2680034 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID638122930 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_738305 
Protein GI114047755 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA CCAGAGAAAA TACCCTTAAA CCCCTTCGCC GTTTAAGACG CCTGCGCCGC 
ACCGAGGCCA TGCGTGACTT AGTGCGTGAA ACCCAGATGT CCCTAAGCGA CTTAGTCCAC
CCGCTCTTTA TCGAAGAACA CATCAGCCAT GCCGTGCCCA TTTCAACCTT GCCGGGGATC
AGCCGTCTGC CAGAGAGTGC GCTTGCCGAT GAAATTCAAA GGCTTTACGC CCTAGGGATC
CGTTATGTGA TGCCCTTTGG AATTTCCCAC ACCAAAGATG CACAGGGCAG CGACACTTGG
GATGACAATG GCTTACTCGC GCGAATGATC CGCACTATCA AAACCGCCGC GCCAGAGATG
ATGGTGATCC CCGATATTTG TTTTTGTGAA TATACCGACC ACGGACACTG CGGCGTAATG
CACCATGACG AAGTCTGTAA TGATGAAACC GTGGCTAACT TAGTCAAACA ATCCATTTGC
GCCGCCAAAG CCGGAGCCGA TATGCTGGCG CCATCGGCCA TGATGGACGG CCAGATTAAA
GCCATTCGCC AAGGGCTGGA TGAAGCAGGC TTTGAGCACA TTGCCATTTT GGCCCATGCA
GCCAAGTTCG CCTCCTCCTT CTATGGGCCT TTTAGGGCCG CGGTGGATTG TGAACTTAGC
GGAAACCGTA AAGGCTACCA GCTCGATTAC GCCAATGGTC GCCAAGCCTT GCTCGAAGCA
CTGCTCGATG AAGAGGAAGG CGCGGATATT TTGATGGTCA AACCCGGCAC GCCTTATTTG
GATGTGTTAA GTCGACTTAG ACAGGAAACC CACCTTCCCT TAGCGGCTTA TCAGGTTGGC
GGCGAATATG CCGGCATTAA GTTTGCCGCT CTGGCTGGCG CCCTCGATGA GCGCGCCGTC
GTCACCGAGA CCTTTATCGG ATTAAAGCGT GCGGGCGCCG ATTTAATTGT CAGCTATTAC
GCGAAACAAT ATGCCGAGTG GTTAGCGCAA TCCCGCTAA
 
Protein sequence
MSSTRENTLK PLRRLRRLRR TEAMRDLVRE TQMSLSDLVH PLFIEEHISH AVPISTLPGI 
SRLPESALAD EIQRLYALGI RYVMPFGISH TKDAQGSDTW DDNGLLARMI RTIKTAAPEM
MVIPDICFCE YTDHGHCGVM HHDEVCNDET VANLVKQSIC AAKAGADMLA PSAMMDGQIK
AIRQGLDEAG FEHIAILAHA AKFASSFYGP FRAAVDCELS GNRKGYQLDY ANGRQALLEA
LLDEEEGADI LMVKPGTPYL DVLSRLRQET HLPLAAYQVG GEYAGIKFAA LAGALDERAV
VTETFIGLKR AGADLIVSYY AKQYAEWLAQ SR