| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2259 |
|---|
| Symbol | |
|---|
| ID | 4256026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2677976 |
|---|
| End bp | 2678686 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122929 |
|---|
| Product | peptidase M22, glycoprotease |
|---|
| Protein accession | YP_738304 |
|---|
| Protein GI | 114047754 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC CCCAAGACTC TGTTTGTATT CTCGCCCTCG ACACTTGTAC CGAAGCTTGT
TCGGCTGCCC TGTATTATCA AGGACAGGTT TTTGCTGAGT TAGCCGATGC GCCTCGGGAA
CATAGTCAGC GTTTATTGCC TATGGTGGAA GCCGTATTAA AACAAGCCAA TGTCGGCTTA
GATAAACTGG ATGCCATTGC CTACGGCCGT GGGCCAGGCA GTTTTACGGG GATCCGTATT
TGCACCAGCA TGACCCAAGG TTTAGCCCTA GGGTTAGACT TACCCGTGAT CGGTATTTCA
ACCTTAGCGG CCATGGCACA AATGGCGATT GCTGAGCACG CTGCCGAGCA AGTGCTTTGC
TGTATCGATG CTCGTATGGG AGAAGTGTAC TGGGGGCAAT TTGTTGCCGT CGATGGCATT
GCCACCTTAG TCGGTAAAGA GGTGGTGAGC GCGCCAGAGC AGGTTGAACT GGCATTCGAT
CTTAACAAAG CCATTGTCGG CTGTGGCACT GGGTTCGATG CTTATCTCGA ATTATTAGCG
TTAGGCTGCG GTATTACCTC CTTAGCGGCG GTGAAGTATC CCGATGCCAG TGCCATGATA
GCGCTAGCCG AAGTCGGTAT CAAAGCGGGA TTAACCACCA GTGTTGATGA ACTTGAGCCA
GTCTATTTAC GTGATACTGT GACATGGAAA AAGTTGCCGG GACGTGAATA A
|
|---|
| Protein sequence | MTTPQDSVCI LALDTCTEAC SAALYYQGQV FAELADAPRE HSQRLLPMVE AVLKQANVGL
DKLDAIAYGR GPGSFTGIRI CTSMTQGLAL GLDLPVIGIS TLAAMAQMAI AEHAAEQVLC
CIDARMGEVY WGQFVAVDGI ATLVGKEVVS APEQVELAFD LNKAIVGCGT GFDAYLELLA
LGCGITSLAA VKYPDASAMI ALAEVGIKAG LTTSVDELEP VYLRDTVTWK KLPGRE
|
|---|
| |