Gene Shewmr7_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2221 
Symbol 
ID4255952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2633121 
End bp2633933 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content48% 
IMG OID638122889 
Producthypothetical protein 
Protein accessionYP_738266 
Protein GI114047716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0258395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.328142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCACAA TTCCAACGTT ATTCGTGAGT CTCGCACTCA CCCACAGCGT ATTTGCGATG 
GCGGCGCCAA CGCCTTTAAC GCCTCAAACT GCTGAATATC AAGTTAATTA TGGTGATATT
GAGTTGGGTA AGGCCAAGTA TCAACTGCCC GCCATGGAGG ATGGGATCTA CAAATATCGC
TTCGACAGCG ATCTTAGCCT GTTATTACTG ACCGATGTGC GCCATGTGCT GAGTGAGTTT
GCTCAGGATG GCAAGCAATT ATTACCCCTG CGCTATTTGC ATGAGCGCCA AGGTGTCGGC
CCGAATTTTA TCGAGCAAAC CGCCTTTGCC AAGGGGCAAG GGATGATCCA CACCCGTTAT
AAGGATGAAA AAGGTAAATT CCCCTTCGAA GGAGATATTT TCGATCCGTT AATGGTGCAG
CTGCAGTTTC GTCTCGATAT CAGCGCTGGT AAAGAAGTGC TTGATTATAA GATGATTAAA
TCTAACGAAC TCGATGAGTA TAAGTTCCAT GTGATTGGTA AGGAGCGGAT GACAATTGAG
AGCGGCAGTT ACGATACTGT CAAAATTGAG GTCGTGCGGG ACAATAATAA ACGCCAAACC
TTCTTCTGGA TGGCGCCGGA TTTAGCCTAC CTCCCCGTTC GTCTAACGCA CTTTGAAAAA
GGCAGCAAAC AGCTGGATAT CAAACTGCTG AATTATCATT TCGACGATGT GCCAGTTGAA
GTCGTACCCG CTGCCGTTGA AGCCGCAGCC GTTGATACTG AAGTTCCAAC GGAGCAGAAA
GTCCCTAAAC TCCTCGGCAC AGGCGCGAAT TAA
 
Protein sequence
MRTIPTLFVS LALTHSVFAM AAPTPLTPQT AEYQVNYGDI ELGKAKYQLP AMEDGIYKYR 
FDSDLSLLLL TDVRHVLSEF AQDGKQLLPL RYLHERQGVG PNFIEQTAFA KGQGMIHTRY
KDEKGKFPFE GDIFDPLMVQ LQFRLDISAG KEVLDYKMIK SNELDEYKFH VIGKERMTIE
SGSYDTVKIE VVRDNNKRQT FFWMAPDLAY LPVRLTHFEK GSKQLDIKLL NYHFDDVPVE
VVPAAVEAAA VDTEVPTEQK VPKLLGTGAN