Gene Shewmr7_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2218 
Symbol 
ID4255949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2630790 
End bp2631638 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID638122886 
Producthypothetical protein 
Protein accessionYP_738263 
Protein GI114047713 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.62552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.843738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA AATTCATAGG GTTTATGGGC GCGCTGGCAT CGATTAGCAT CTTGCTTAGT 
GGTTGCAGTG CTTTTTTTAA CGGTAACACC ACCGAAAAAA ACGTAGTTTC CAGCAGTCTG
GTTGAATATC TCTATCCCGA TGATAAACAA CGCGAGGCTC AGCAACCCAG TATTCCGGTA
TTGCGTCTTC CCATCACGGT TGGCATCGCC TTTTTACCTT CCACCCATTG GCAATTCGAA
GCCCTCGATA GCAGCTCGCA AATCGCCTTG CTGGATAAAG TGAAACAATC CTTTGTTAAA
TATGACTTTA TTGATCGTAT CGAATTAATC CCCAGCACTT ACCTTAAAAA TGGCAAAGGT
TTTAGCACCT TGCAGCAGGT TGCCCGCTTG CACGATGTCG ATGTGATGGC GCTGGTGTCT
TACGATCAAC TGTTACAAAG CAGCGAGAAT AAGGCTTCAC TGCTGTATTG GACCATAGTC
GGCATGTATA TGGTGCCCGG CAATGAAAAC GCGATCCAAA CCTTTGTCGA TACCGCCGTT
TTTGATATGC GCAGCCAAAA AATGTTGTTC AGAGCGCCCG GTATCAACCA ACTTACCGAC
ACGTCAACCG CAGTGAGCGT CACCAACGTG CTACGTGAAA AATCCGCCGA GGGCTTTGAG
CTGGCGGTAA ACGATATGAT CACTAACTTA GACGCCGAAT TAGCCCGCTT TAAAACCCGC
GTGAAAGAAG AACATATTGC GACCATTGAA CATAAACAAG GTTATAGCGG TGGTGGCAGT
TTATCCCTAT TAATCCTTTC GCTACTGGGT ATATTTGCAA TTCGCCGTTT AACTATCTGC
AGAGATTAA
 
Protein sequence
MKTKFIGFMG ALASISILLS GCSAFFNGNT TEKNVVSSSL VEYLYPDDKQ REAQQPSIPV 
LRLPITVGIA FLPSTHWQFE ALDSSSQIAL LDKVKQSFVK YDFIDRIELI PSTYLKNGKG
FSTLQQVARL HDVDVMALVS YDQLLQSSEN KASLLYWTIV GMYMVPGNEN AIQTFVDTAV
FDMRSQKMLF RAPGINQLTD TSTAVSVTNV LREKSAEGFE LAVNDMITNL DAELARFKTR
VKEEHIATIE HKQGYSGGGS LSLLILSLLG IFAIRRLTIC RD