| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2210 |
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| Symbol | |
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| ID | 4255941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2618747 |
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| End bp | 2621566 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638122878 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_738255 |
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| Protein GI | 114047705 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.922115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAT TTAAACCCAG CTTGCTGACC TTAGCACTCG TTGCTGCAGG CGCCAGTATG
CACTCTTACG CAGCAGATGA TGTAAAAGAA AAAGACCTAA AAGCCAAAGA TGCCGAAATT
GAAGTAATCC AAGTTAAAGG CTTCAGAACC AGTGTGATCA AATCGCTTAA TGAAAAACGT
TTTGGCGATA CCGTATCTGA ATCTATCTCT GCCGACGACC TCGGCGCCCT GCCCGACCAA
TCTATCGCCG ATGCGTTAAC CCGTTTACCA GGCGTCACCG CTGTTCGTAC TGGCGGCCAA
GCCAGTGGTT TGAACATCCG TGGTCTGGAT GGCGATTTCG TGTTTGCAAC CCTCAATGGC
CACGAACAGG TGACCACTGG TGGTAAACGT GCCATTGAGT TTGACCAATA TCCATCCGAA
TTAATTAGTC AGGCTGCGGT TTACAAAACA CCTAAAGCCT CGCTGATCGA AGGCGGCGTG
GCCGGTACGG TTGAATTAAA AACCGCCGAT CCGCTGAAGA ATGACAAAGA TCAATCATTC
AATATCAATG CCCGTGGCAG TTTTAACGAT CGCGCCGATG AAATCTCTGA TGCAGAGCAA
TACGGCAATC GTTTAAGCCT CGCTTATCAA GGTAAATTCC TCGAGGACAC CTTAGGGGTG
GCAGTAGGCT ATGCCCACCT GTATCAACCT TATGTTGCAA GCCAATTCAT TGGGTTACGT
TTTAATGATG ATAAAAAAGA CGTTAACGGT GACGGTGTAA CCGAAGCGAT TAGTGAAGGT
TTTGAACTGC AACAAAAAGG CGGCGACGAT ACCCGTGATG GTTATATGGC TGCTATCCAT
TGGCAACCGA GTGATAGCCT GAGTGTGAAG GGTGATCTAT TCCACTCTAA ATTTACCTCT
GAAAACTTTG CCCGTGGTTT CCGCGTCAAG TCATTGAAAA ACGGCACTAT CAGCGATGCC
GTTGTCGAAA ACGGTTCTAT GACGGGTGGT ACAGTCTCTA CTGATGGCAC GGATAACTTT
GCGGTTTTCG TGATCAACGA TAACGACTCA AAATACTCAG AATTAACTTC AGGCTCATTG
AACCTTGAAT GGAATAACGG TGGCGCACTG ACAGTGGCGG CCGATGTCAG CTATTCCAAA
GCCGATGGCG AATTCGTTAA CGGCGGTACT CGCGCCGTGT TGTACGATGA TCTAGGCAAT
GAAGTTCGCT CAGCAGAATC TGTTACTTAT CAACTGAATG GCTTAAGTCC TGCGGATGTC
AGCTTTGCTA ACGACTACAC CAATACCTCG ACCCTAGGTC TGAAAGAAGT GGGTATGTGG
CCGTATAATC AGCAAAACGA TCTGATTGCC TACAAGCTCG ATTTTAACTA TGTCTTAGAT
ACCAGCTTTG TCTCTTCTGT TGATTTTGGT GTGCGTTATG CTGAACGTGA ATTCAACGCA
CAGCGTTCAC AGGCAGGTTA CGGTTTCGAG TTTGGTAAAA ACCCTGATAA TCAACCAGTC
CTAGCTCTGA ACGGCGATAT GGCCAAAGTG GTTGATTTTG GTGGTGAATT AGCAGGTTAC
CCAAGTTTCC TCGCCATTGA CTTTAACAAA GCCATTGAAC TGGTGAACGC ACAACTGGCG
GCGACAGGCC AATCACCTTT CACTCCAACG GCGAACTGGT CAAATAACTG GACCATGATC
CAAAGCGGCG CGGTCAATGA AGATGTATTA GCCGGCTACG TGCAGGCAAA CTTAGACTTC
GATATCGGCG ATGTTAAAGT CACAGGTAAC TTAGGTGTAC GTGTAGTACA CACAGATCAA
AGCAGTACTG GTCTGCAACA AGTTGGTTAT GGTTTAGGTG AAGCCATTAC CGATGAGCAA
GGCGTCGTAA GCACGGATTA TATCCGTAAC AAGGTCGGCA AAACCTATAC CGACTACTTA
CCTTCTCTGA ACTTAACCTT CCACCTGACT GAAAACGATC AACTGCGTTT TGCAGCGGCC
TCTGTGATGT CACGCCCACC AATCGACAAG TTAAAGTCAG GTATGGGTTC TTGGTATGAC
GATTCTGCTA CGCCAGGATA CAAAAAGTAC AATGCGTGGG GTAACACCAG TCCGTTATTA
GATCCTTTCT ATGCAGATCA ATATGACTTG TCCTACGAGC ACTACTTTGA AGAGTCTGAA
GGTGCGGTCG TTGTGGCCTT GTTCTATAAA GATATTAAAT CTTTCATCAA CAACTTCACT
ATTCAACCAT TTGATTTTGA AGCGAATGGC TTTATCGTGC CCGATACCAT TATCGACAAT
GGCGTTGAGT TCCCTGTCGT TAAAGATGAA GGCCAATATC AAACAGCCAT CAACAACGAT
AAAGGCGGTT ATATCCGTGG TATCGAGTTA GGCTATACCC AAGTGTTTGA TTTCCTACCG
TCACCTTTAG ATGGTTTAGG TTTCACTGGT AGCTATTCCT ATTCAGACAG TGAAGTGGAA
TTCACCACAG ACTTAAGCGG TTCTAACCTG ACCATTCCAT TACCTGGTCT GTCAGAAAAC
GTGCTGAACA CTACCCTGTT CTACACCTTG GATGGTTTCG ATACCCGTGT AAGCATGAGA
TACCGTAGTA GTTATGTGTC AGAGCAAGTT GCGGTTGAAT CTCAACTGGC GTTCTTTGAT
GCAGAAACGA TTGTGGATTA TCAGGCTTCT TATGCGCTGG ACAACGGCCT TAAGTTCCTG
TTCCAAATCA ATAACCTCAC CGATGAGCCT AATAAAACTT ACTTTGGTGA AGAGCATCAA
ACCGGAACAA TTCAATACTT CGGTAGACAA TATTTCCTGG GTTTAACCTA CTCTCTGTAA
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| Protein sequence | MMRFKPSLLT LALVAAGASM HSYAADDVKE KDLKAKDAEI EVIQVKGFRT SVIKSLNEKR
FGDTVSESIS ADDLGALPDQ SIADALTRLP GVTAVRTGGQ ASGLNIRGLD GDFVFATLNG
HEQVTTGGKR AIEFDQYPSE LISQAAVYKT PKASLIEGGV AGTVELKTAD PLKNDKDQSF
NINARGSFND RADEISDAEQ YGNRLSLAYQ GKFLEDTLGV AVGYAHLYQP YVASQFIGLR
FNDDKKDVNG DGVTEAISEG FELQQKGGDD TRDGYMAAIH WQPSDSLSVK GDLFHSKFTS
ENFARGFRVK SLKNGTISDA VVENGSMTGG TVSTDGTDNF AVFVINDNDS KYSELTSGSL
NLEWNNGGAL TVAADVSYSK ADGEFVNGGT RAVLYDDLGN EVRSAESVTY QLNGLSPADV
SFANDYTNTS TLGLKEVGMW PYNQQNDLIA YKLDFNYVLD TSFVSSVDFG VRYAEREFNA
QRSQAGYGFE FGKNPDNQPV LALNGDMAKV VDFGGELAGY PSFLAIDFNK AIELVNAQLA
ATGQSPFTPT ANWSNNWTMI QSGAVNEDVL AGYVQANLDF DIGDVKVTGN LGVRVVHTDQ
SSTGLQQVGY GLGEAITDEQ GVVSTDYIRN KVGKTYTDYL PSLNLTFHLT ENDQLRFAAA
SVMSRPPIDK LKSGMGSWYD DSATPGYKKY NAWGNTSPLL DPFYADQYDL SYEHYFEESE
GAVVVALFYK DIKSFINNFT IQPFDFEANG FIVPDTIIDN GVEFPVVKDE GQYQTAINND
KGGYIRGIEL GYTQVFDFLP SPLDGLGFTG SYSYSDSEVE FTTDLSGSNL TIPLPGLSEN
VLNTTLFYTL DGFDTRVSMR YRSSYVSEQV AVESQLAFFD AETIVDYQAS YALDNGLKFL
FQINNLTDEP NKTYFGEEHQ TGTIQYFGRQ YFLGLTYSL
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