| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2209 |
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| Symbol | |
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| ID | 4255940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2616626 |
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| End bp | 2618248 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122877 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_738254 |
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| Protein GI | 114047704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGT TAACTTGGTG GCGTGGAGCC GTGATCTATC AAATTTATCC ACGTAGCCTT
TTGGATACTA ATGGTGATGG CGTTGGCGAT CTGCGCGGTA TTATCACCAA GTTGGACTAT
ATTGCCAGCC TGAATGTGGA TGCCATTTGG ATTTCGCCGT TCTTTAAATC CCCCATGGCT
GACTTTGGTT ACGATATCAG TGACTATCGC GAGGTGGATC CACTGTTTGG TTCGATGCAG
GATTTCGATG AGCTGATCGA AAAAGCCCAT CAACGTGGCA TTAAAGTCAT TATCGACCAA
GTGTTGAGCC ATACGTCGGA TCAGCATGCT TGGTTTATCG AAAGTCGTGA GAGCCGCACC
AATCCCAAGG CCGATTGGTA TGTCTGGGCC GATCCTAAGG AAGATGGGAC GGCGCCAAAC
AACTGGTTGG CGATTTTCGG CGGTTGCGCC TGGGAGTGGG AACCGCGCAG ACAACAATAT
TATCTGCACA ACTTTTTACG CAGTCAGCCC GATATAAACT TCCATAATCC TGAAGTGCGT
CAAGCCGTGT TAGATAATGT GGAGTTTTGG TTGAAGAAGG GCGTCGATGG TTTCCGCCTA
GATGCTATTA CCTTCTGTTA TCACGATGAG CAGCTTCGGG ATAACCCTGC AAAGCCAAAA
GATAAACGCC AGGGGCGTGG ATTTAGTGAA GATAATCCCT ACGCCTATCA GTACCATTAC
TACAATAATG ATCGTCCGCA AACGATTCTA TTTATTGAAG AATTACGCCA GCTGATCAAT
CGCTATCCGG GTGCTGTGAC CTTAGGCGAA GTCTCCGCTG AGGATTCTCT CGCGGTGATG
GCTGCCTATA CCAAGGGTGA AGACCGCTTA CATATGGCCT ACAGTTTCGA GTTGCTGACC
GATGACTATA GCGCCGCTTA TATTCGCCAA ACCGTCGAGG CTCTGGAAGC CAGCATTGGT
GATGGTTGGC CCTGCTGGGC GATTGGTAAC CACGATGTGC AGCGCGTCGC CAGCCGTTGG
GGGCGGGGCA AGCAAACCCA CGACATGGTG AAAATGCTTA ATGCCATGCT TAGCTCACTT
CGCGGCAGTG TCTGTAATTA CCAAGGGGAA GAGCTCGGCT TAACCGAGGC ACCAATTGAA
TACCATGAAT TGCAGGATCC CTTCGGCAAA ACCTTCTGGC CAATGTTTAA GGGCCGTGAT
GGTTGCCGTA CTCCTATGCC GTGGGAGCAA CACGCCGATT TTAGCGGCTT TAGCCAAGTG
ACACCTTGGT TGCCTGTGGC GAATGCACAC AGAGCACTGG CGGTCGATGT GCAGGAAGCC
GATCCCGCTT CAATGCTGCA GGGCTATCGT CAGTTCCTCG CGTGGCGCAA AGGCTATCCT
ATCTTAATCG AAGGGGAGAT TGAGTTCCTC GACGCGCCTG AGCCGTTATT GGTGTTTGTG
CGAACACTGG GTGAGCAGAA ACTCCTTGTG TGTTTCAATC TATTAGACAC AGAAACCCAG
TGGGTGCTGG ATAAGCTCAG CATACAACAA GAATTGACCG GGCATGGCTT GAAAACTGCG
CAAAGGGTCG CTGACACATT GACATTCTCG GCCTATGCCT GCTTTTATGC GCTGTTGAAC
TAG
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| Protein sequence | MSELTWWRGA VIYQIYPRSL LDTNGDGVGD LRGIITKLDY IASLNVDAIW ISPFFKSPMA
DFGYDISDYR EVDPLFGSMQ DFDELIEKAH QRGIKVIIDQ VLSHTSDQHA WFIESRESRT
NPKADWYVWA DPKEDGTAPN NWLAIFGGCA WEWEPRRQQY YLHNFLRSQP DINFHNPEVR
QAVLDNVEFW LKKGVDGFRL DAITFCYHDE QLRDNPAKPK DKRQGRGFSE DNPYAYQYHY
YNNDRPQTIL FIEELRQLIN RYPGAVTLGE VSAEDSLAVM AAYTKGEDRL HMAYSFELLT
DDYSAAYIRQ TVEALEASIG DGWPCWAIGN HDVQRVASRW GRGKQTHDMV KMLNAMLSSL
RGSVCNYQGE ELGLTEAPIE YHELQDPFGK TFWPMFKGRD GCRTPMPWEQ HADFSGFSQV
TPWLPVANAH RALAVDVQEA DPASMLQGYR QFLAWRKGYP ILIEGEIEFL DAPEPLLVFV
RTLGEQKLLV CFNLLDTETQ WVLDKLSIQQ ELTGHGLKTA QRVADTLTFS AYACFYALLN
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