| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2200 |
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| Symbol | |
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| ID | 4255510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2604511 |
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| End bp | 2606055 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122868 |
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| Product | fumarase |
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| Protein accession | YP_738245 |
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| Protein GI | 114047695 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000257918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTC ACCATGAAAC GTCTGAAAAT GTAGTGATTA AACAAGCCGA CTTTATTGAA
AGTGTGGCCG ATGCCCTGCA ATACATTTCC TATTATCATC CCAAAGATTT TGTTGATGCC
ATGAGCGAAG CTTATGAGCG TGAGCAAAGT GCGGCGGCGA AGGATGCGAT TGCGCAGATT
TTGATTAACT CGCGTATGTC TGCCGAAGGT AAACGCCCAC TGTGCCAAGA CACGGGTATT
GTGACCACCT TCGTTAAGAT TGGTATGGGG GTTAAGTGGG ACAAAACCGA TATGACCGTG
CAACAAATGG TCGATGAAGG TGTGCGTCGT GCTTATACCA ATCCAGATAA CCCGCTGCGT
GCATCGATTG TGGCCGATCC TGCCGGTAGC CGTAAAAACA CCAAAGACAA CACGCCATCT
GTCGTGCATA TCGATATGGT GCCAGGTAAT CATGTTGAAG TCGCTATCGC AGCCAAGGGC
GGCGGCAGTG AAAACAAAGC TAAGATGGTG ATGTTAAACC CATCTGATGA TATCGCCGCT
TGGGTTGAAA AAACGCTGCC AACGATGGGC GCGGGCTGGT GTCCTCCAGG TATGCTCGGC
ATTGGTATTG GCGGCACCGC TGAAAAAGCG GCCGTACTCG CGAAAGAAGC GCTGATGGAA
AGCGTGGATA TCCATGAGTT AATGGCGCGC GGCGCAGAAA CCAGCGAAGA AAAACTGCGT
TTAGACATTT TCGAACGTGC TAATAACCTC GGTATTGGTG CGCAGGGTCT TGGCGGTTTA
ACCACAGTGT TAGACGTGAA AATTAAATCT GCACCTACTC ATGCAGCATC AAAACCTGTG
GTGATGATCC CGAACTGCGC GGCAACTCGC CACGTACACT TCCATTTAGA TGGTACGGGC
CCTGCTGATC TTGCGCCGCC GACACTCAGC GACTGGCCAG AAATTACCCG CGAAGTGGGC
AGCGATGTGC GCCGTGTTAA CTTAGACACA GTCACTCAAG CCGATATCGA GCAGTGGAAG
AGCGGTGAAA CCATTCTGTT AAGCGGTAAA ATGCTCACCG GCCGTGATGC TGCCCATAAG
CGTATCCAAA GCCTGATTGA AAGCGGCGAA GGTTTACCAG AAGGCGTGGA CTTTACTGGC
AAGTTTATCT ACTACGTGGG CCCAGTTGAC CCAGTTGGTA ACGAAGTCGT GGGTCCTGCT
GGCCCAACAA CCGCGACCCG TATGGACAAG TTCACCGATC TGATGCTGGA TAAAACCGGC
CTGATGGGCA TGATTGGTAA GGCTGAACGT GGTCCAGCGA CCGTTGAGTC TATCAAGAAA
CACAAAGCTG TGTACCTGAT GGCTGTGGGC GGCGCGGCTT ACTTAGTGTC GAAAGCCATT
AAGAAATCCC GCGTAGTGGC GTTTGCCGAT TTAGGTATGG AAGCCATTTA CGAGTTTGAC
GTACAAGATA TGCCAGTGAC TGTGGCGGTA GACTCAAACG GCGTGAATGC CCATGAAACT
GGCCCTGCGA TTTGGAAAGT GAATATCGCT AACGCCAAAG CCTAA
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| Protein sequence | MSSHHETSEN VVIKQADFIE SVADALQYIS YYHPKDFVDA MSEAYEREQS AAAKDAIAQI
LINSRMSAEG KRPLCQDTGI VTTFVKIGMG VKWDKTDMTV QQMVDEGVRR AYTNPDNPLR
ASIVADPAGS RKNTKDNTPS VVHIDMVPGN HVEVAIAAKG GGSENKAKMV MLNPSDDIAA
WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELMAR GAETSEEKLR
LDIFERANNL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGTG
PADLAPPTLS DWPEITREVG SDVRRVNLDT VTQADIEQWK SGETILLSGK MLTGRDAAHK
RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGNEVVGPA GPTTATRMDK FTDLMLDKTG
LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KKSRVVAFAD LGMEAIYEFD
VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NAKA
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