Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2196 |
Symbol | |
ID | 4255506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2599074 |
End bp | 2600330 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122864 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_738241 |
Protein GI | 114047691 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCCT TAGTCGATGC CAACTCGTTT TACTGCTCGG CTGAGCAAGT GTTCCGCCCC GATTGGCGCG GTAAACCGAT TATCGTCCTA AGCAATAACG ATGGCTGTAT CGTGGCAGCC AACCGCCAGG CCAGAGAACT TGGGGTCCCC AAATTTGCGC CGTACTTTCA TGTCAAAGAG CAGTGCGCCA AACTAGGGGT GATAGTGTGC TCAAGCAACT ACGAGCTTTA TGCCGATTTG TCAGCAAAAA TGATGGAAAT CATCGGCCGC TTCGCTCCCG AGCAACATAT TTACTCCATT GATGAATCGT TTTTATCCTT CAAGCACTGC CACTCCAGCA TTCCCAGCTT AAAAACGCAA GGACTGCGTA TCCGTCAAAC CGTTTGGAAA GAAGCTCGCT TACCCGTTTG TGTTGGTATA GGTGCAACAC TCACATTGGC TAAAATCGCC AATCATGCTG CCAAAAAACT ACCTGGTTAT CATGGCGTTT GCCTGATTGA TAATGACCCA CAACGGATTG AAATTCTCAA GCAACTCTCA GTCGGTGACG TGTGGGGAAT TGGACGACGG CTCAGCAAAA AGCTGGCGAG TATGGGCATT CAGACCGCTT ACGACCTTGC GCAAATGCCA GCAGGCCTTG CACGCAAGCA ATTCAGCATA GAGATAGAGC GAACAGTCCG AGAACTTAAT GGCACTGCCT GTAAACAATG GGACCACACA CGGGCGGATA AACAACAGAT ATTTTCCACT CGCTCCGTGG GTGAGCGCAT CATGGATTTT GATTCGTTAC TACAGGCATT GAGCAAACAC GTTGGAATTG CAGCGGCAAA AGCTAGGGCG CAAGGTTCGT GCTGCAAATC GATGCTGATT TTTGCCAATA ACTCCCCTTA CGACGAACAA CCCGTCGGTT TTAAATCCCT TATCCATTTC CCCACGGCAA CCAATTGCAC GATTGAAATG ACGCAGGCAA TGTCTTTGGC TGCCCCAAAA TTATTTCGAC CAGGAATTAG GTACTACAAG ATAGGTGTAG GCTTGATTAA TCTCGAACAG GATAGATATC AGCAACTCGA TTTGTTCAAT CGTCCTAAAA CCAAACCCAT ACTAATGAAC GCACTGGATG GAATAAATTC CCGCTATGGA CAAGACACCT TATTTTTGGC AGCACAAGGC ATAGAACAAA AATGGGCAAT GCGGCGGGCA TTACTAACGC CACAATACAC CACTCTGTGG GGCGGCATAC CGAGAGTCAA GTGCTAA
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Protein sequence | MYALVDANSF YCSAEQVFRP DWRGKPIIVL SNNDGCIVAA NRQARELGVP KFAPYFHVKE QCAKLGVIVC SSNYELYADL SAKMMEIIGR FAPEQHIYSI DESFLSFKHC HSSIPSLKTQ GLRIRQTVWK EARLPVCVGI GATLTLAKIA NHAAKKLPGY HGVCLIDNDP QRIEILKQLS VGDVWGIGRR LSKKLASMGI QTAYDLAQMP AGLARKQFSI EIERTVRELN GTACKQWDHT RADKQQIFST RSVGERIMDF DSLLQALSKH VGIAAAKARA QGSCCKSMLI FANNSPYDEQ PVGFKSLIHF PTATNCTIEM TQAMSLAAPK LFRPGIRYYK IGVGLINLEQ DRYQQLDLFN RPKTKPILMN ALDGINSRYG QDTLFLAAQG IEQKWAMRRA LLTPQYTTLW GGIPRVKC
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