Gene Shewmr7_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2196 
Symbol 
ID4255506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2599074 
End bp2600330 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID638122864 
ProductDNA-directed DNA polymerase 
Protein accessionYP_738241 
Protein GI114047691 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCCT TAGTCGATGC CAACTCGTTT TACTGCTCGG CTGAGCAAGT GTTCCGCCCC 
GATTGGCGCG GTAAACCGAT TATCGTCCTA AGCAATAACG ATGGCTGTAT CGTGGCAGCC
AACCGCCAGG CCAGAGAACT TGGGGTCCCC AAATTTGCGC CGTACTTTCA TGTCAAAGAG
CAGTGCGCCA AACTAGGGGT GATAGTGTGC TCAAGCAACT ACGAGCTTTA TGCCGATTTG
TCAGCAAAAA TGATGGAAAT CATCGGCCGC TTCGCTCCCG AGCAACATAT TTACTCCATT
GATGAATCGT TTTTATCCTT CAAGCACTGC CACTCCAGCA TTCCCAGCTT AAAAACGCAA
GGACTGCGTA TCCGTCAAAC CGTTTGGAAA GAAGCTCGCT TACCCGTTTG TGTTGGTATA
GGTGCAACAC TCACATTGGC TAAAATCGCC AATCATGCTG CCAAAAAACT ACCTGGTTAT
CATGGCGTTT GCCTGATTGA TAATGACCCA CAACGGATTG AAATTCTCAA GCAACTCTCA
GTCGGTGACG TGTGGGGAAT TGGACGACGG CTCAGCAAAA AGCTGGCGAG TATGGGCATT
CAGACCGCTT ACGACCTTGC GCAAATGCCA GCAGGCCTTG CACGCAAGCA ATTCAGCATA
GAGATAGAGC GAACAGTCCG AGAACTTAAT GGCACTGCCT GTAAACAATG GGACCACACA
CGGGCGGATA AACAACAGAT ATTTTCCACT CGCTCCGTGG GTGAGCGCAT CATGGATTTT
GATTCGTTAC TACAGGCATT GAGCAAACAC GTTGGAATTG CAGCGGCAAA AGCTAGGGCG
CAAGGTTCGT GCTGCAAATC GATGCTGATT TTTGCCAATA ACTCCCCTTA CGACGAACAA
CCCGTCGGTT TTAAATCCCT TATCCATTTC CCCACGGCAA CCAATTGCAC GATTGAAATG
ACGCAGGCAA TGTCTTTGGC TGCCCCAAAA TTATTTCGAC CAGGAATTAG GTACTACAAG
ATAGGTGTAG GCTTGATTAA TCTCGAACAG GATAGATATC AGCAACTCGA TTTGTTCAAT
CGTCCTAAAA CCAAACCCAT ACTAATGAAC GCACTGGATG GAATAAATTC CCGCTATGGA
CAAGACACCT TATTTTTGGC AGCACAAGGC ATAGAACAAA AATGGGCAAT GCGGCGGGCA
TTACTAACGC CACAATACAC CACTCTGTGG GGCGGCATAC CGAGAGTCAA GTGCTAA
 
Protein sequence
MYALVDANSF YCSAEQVFRP DWRGKPIIVL SNNDGCIVAA NRQARELGVP KFAPYFHVKE 
QCAKLGVIVC SSNYELYADL SAKMMEIIGR FAPEQHIYSI DESFLSFKHC HSSIPSLKTQ
GLRIRQTVWK EARLPVCVGI GATLTLAKIA NHAAKKLPGY HGVCLIDNDP QRIEILKQLS
VGDVWGIGRR LSKKLASMGI QTAYDLAQMP AGLARKQFSI EIERTVRELN GTACKQWDHT
RADKQQIFST RSVGERIMDF DSLLQALSKH VGIAAAKARA QGSCCKSMLI FANNSPYDEQ
PVGFKSLIHF PTATNCTIEM TQAMSLAAPK LFRPGIRYYK IGVGLINLEQ DRYQQLDLFN
RPKTKPILMN ALDGINSRYG QDTLFLAAQG IEQKWAMRRA LLTPQYTTLW GGIPRVKC