Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2194 |
Symbol | |
ID | 4255504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2597523 |
End bp | 2598167 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122862 |
Product | hypothetical protein |
Protein accession | YP_738239 |
Protein GI | 114047689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.645271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCAGG ATCCTCAAAC ACCGCCTAGC TTACTGCCTT TTTCTCAAGC CTGTGAAAAT AACAAAGCGC CAATACTCGC CGTGCTACAA ACCGCCTTTG CCAGCGCCAA ACAGGTGCTG GAAATTGGCA GCGGCACGGG ACAACATGCA GTTTATTTTG CTGAAAATCT ACCTCAGCTT TTCTGGCAAA CCAGCGATCA AGCCGATTAC CTTGAGGGCA TTAGCGCAAG ATGCCACCAA CAAGGACATC AAAAAGGTAT CAACAACCTC GGCTTGCCCT TCGCACTCGA TGTCACCCAA CCTTGGCCCA TTAATGACAC CCGCATCGAC GCCGTCTTCA GCGCCAATAC CTTGCATATT ATGAGTCAAA CCATGGTTGA AGCCTTTTTT GCTGGTTTGA GCCAATATTT GCCACAACTC AATACCCTCT GTATTTACGG CCCTTTTAAC TACCAAGGCA AGTTTACCAG CGACAGTAAT CGTCAATTCG ATCAGTATTT AAAACAAAGA GATAGTGAGA GTGGTATTCG GGACATAGAA TGGATTATTC AGCTCGCCCA AGCGCAAGCC TTCACATTGG TTGCTGATAC CGCCATGCCC GCCAATAATC GGCTACTGCA TTTTTCAAAA CGCGCCACAG ACTGA
|
Protein sequence | MFQDPQTPPS LLPFSQACEN NKAPILAVLQ TAFASAKQVL EIGSGTGQHA VYFAENLPQL FWQTSDQADY LEGISARCHQ QGHQKGINNL GLPFALDVTQ PWPINDTRID AVFSANTLHI MSQTMVEAFF AGLSQYLPQL NTLCIYGPFN YQGKFTSDSN RQFDQYLKQR DSESGIRDIE WIIQLAQAQA FTLVADTAMP ANNRLLHFSK RATD
|
| |