Gene Shewmr7_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2188 
Symbol 
ID4255498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2591131 
End bp2591481 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content46% 
IMG OID638122856 
Producthypothetical protein 
Protein accessionYP_738233 
Protein GI114047683 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0711794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA TGCCACTCAA AACCCTGCTA CAAAAGCCAA CATTACTCCT GTTGCTCGGC 
CTGAGTTTAT TCAGCTTAAA TGCCTTTGCC ATGTCACTAC AGGAAGCCAA ATCCCAAGGT
TACTTAGGTG AGCAGCTTAA TGGCTATCTG GGACTAGTGC AAAATAATAG CGAGGCCAAA
GCCGTGATGG ACGATGTGAA CAACAAACGC CGCGCCCATT ACGAAACTAT CGCTAAAAAG
AACAATATCT CCGCCGCCGA TGTGGCCAAA CTTGCCGGTG AAAAAGCCAT CGCCGCCACA
GATAAAGGCA ACTATGTGCA AAACGCCCAA GGAAAATGGG TTAAAAAGTA G
 
Protein sequence
MKSMPLKTLL QKPTLLLLLG LSLFSLNAFA MSLQEAKSQG YLGEQLNGYL GLVQNNSEAK 
AVMDDVNNKR RAHYETIAKK NNISAADVAK LAGEKAIAAT DKGNYVQNAQ GKWVKK