Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2182 |
Symbol | |
ID | 4256123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2583386 |
End bp | 2584123 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122850 |
Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
Protein accession | YP_738227 |
Protein GI | 114047677 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.242718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATTC CAGCAATTGA TTTAATTGAT GGCAAGGTAG TTAGGCTCTA CCAAGGGGAT TATGGGCAGC AGACCACCTT CGATTTAAGC CCACAGGCCC AGTTGCAATC TTACCAAGAC CAAGGGGCAA ACTGGCTGCA TATCGTGGAT TTAACTGGCG CCAAAGAACC CGCTAAACGC CAAACGACTT TGATTGCCGA GCTGACTGCG GGGCTAAGTG CCAATATTCA AGTGGGCGGC GGGATCCGCA CTGAAGAACA AGTCGCCGAG TTATTATCCC TTGGAGTTAA ACGCGTGGTG ATAGGCTCGC TCGCCGTCAA AGAGCCCGAG TTAGTCAAAG GCTGGTTTAA CAAGTTTGGC AGCGAGGCTA TTTGCCTCGC ACTGGATATC AATATCAATC AGAGCGGCGA GAAAATCGTC GCGGTTTCTG GCTGGCAAAG CGGTGGCGGT AAGAGTCTAG AATCTATCGT CGAAGACTTT AGCCAAGTTG GGCTTAAACA TGCGCTGGTG ACTGACATCA GTCGCGATGG CACCCTCACA GGCGCCAATA CCGAACTCTA TCGTGAGCTA TCCAGCCGCT ATCCCGATAT CGCTTGGCAA GCCTCGGGCG GCATTGCCAC CCTTGAGGAT GTTGCCGCCG TCAGAGACAG TGGCGCCGCG GGCATCATTA TCGGTAAAGC CTTACTAATC AATCAGTTTA ATGTGGCGGA GGCAATCCAA TGCTGGCCAA ACGAATAG
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Protein sequence | MIIPAIDLID GKVVRLYQGD YGQQTTFDLS PQAQLQSYQD QGANWLHIVD LTGAKEPAKR QTTLIAELTA GLSANIQVGG GIRTEEQVAE LLSLGVKRVV IGSLAVKEPE LVKGWFNKFG SEAICLALDI NINQSGEKIV AVSGWQSGGG KSLESIVEDF SQVGLKHALV TDISRDGTLT GANTELYREL SSRYPDIAWQ ASGGIATLED VAAVRDSGAA GIIIGKALLI NQFNVAEAIQ CWPNE
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