Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2161 |
Symbol | |
ID | 4257642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2559907 |
End bp | 2560668 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122829 |
Product | hydrogenase accessory protein HypB |
Protein accession | YP_738206 |
Protein GI | 114047656 |
COG category | [K] Transcription [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTAAAG ACTGCGGCTG CTCCTTACCC CGCCATTCCC ATGATCACGG CCACCTGCAT CACCATCAGG AATTGCACAC AAATCCTCAG CTTAACGATA AAAAAACCTT GTCGGTGATC CATAAAATTC TCGATAAAAA CGATGTTGAA GCCGCCCATA ACCGCGCGCA TTTTGAGGCG CACAATATTA CCGCGTTCAA TTTAATGAGT AGCCCAGGCA GTGGCAAAAC CACCTTGCTT GAACACTTAA AAGAGTACAC CGCCCTCAAC TACGCCGTCA TTGAAGGGGA TTTAGAGACC TCCCGCGATG CCGACCGCTT AATCGCCAAA GGCATTCAGG CCCATCAAAT TCAAACCGGC AGTGCCTGCC ACCTCGACGC CTTTATGGTG CACGGCGCTT TACATCATTT GCCTCTCGAA GGCTTAGATA TTTGTTTTGT CGAAAACGTG GGAAACCTCG TCTGCCCCGC CAGTTACGAT GTCGGCACCC ATAAAAATAT CGTGCTGCTT TCGGTTCCCG AAGGCGATGA TAAGATTGAG AAATATCCCG TCATGTTCCG CCGTGCCGAT CTGGTGCTCA TCACCAAGTG TGACCTCTTG CCCTACTTCG ATTTCAGTGT TGACGAGGCC AAAGCCCAAC TTAAAAAGCT CAACCCCGAC ACACAGATTT TGGAAGTCTC GATTAAGGAT CGCGATTCCA TGCGAGCCGT CGTTGCATGG CTGAACAACA ACCTTCACCA CGCTTCGGGA GAGCCACAAT AA
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Protein sequence | MCKDCGCSLP RHSHDHGHLH HHQELHTNPQ LNDKKTLSVI HKILDKNDVE AAHNRAHFEA HNITAFNLMS SPGSGKTTLL EHLKEYTALN YAVIEGDLET SRDADRLIAK GIQAHQIQTG SACHLDAFMV HGALHHLPLE GLDICFVENV GNLVCPASYD VGTHKNIVLL SVPEGDDKIE KYPVMFRRAD LVLITKCDLL PYFDFSVDEA KAQLKKLNPD TQILEVSIKD RDSMRAVVAW LNNNLHHASG EPQ
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