| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2155 |
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| Symbol | |
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| ID | 4257636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2551119 |
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| End bp | 2552255 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122823 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_738200 |
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| Protein GI | 114047650 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.021449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.34251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC ATGCAGCCCT CTATGAACAG GGAAAGGCGC GCTTAGATGC ACTGCGCCAA
TTCGCTCCCC GTCAACAACA AACATTAACC GAAAAATTGC AACAACACGG CATTACCCGC
CGTGACTTTA TGAAGTGGAG CGCCATGGTG ACGGGTATGC TCGCCCTACC GCTGCCCTTT
AGTAACTTAG TCGCCGAAGC TGCCGAGCTT GCCGACCGTG TACCCTTAAT CTGGTTACAC
ATGGCCGAAT GTACTGGCTG CTCCGAATCC TTAGTTCGCG CCGATACGCC CAATCTCGAT
TCGCTGATCT TCGATCATAT CTCGTTGGAA TATCACGAAA CCCTCATGGC CGCTGCCGGC
TGGCAAGCAG AGGAAAATCT CGAGCACGCC CTAGAGACCT ACAAGGGTCG TTACCTGCTC
GCCGTTGAAG GCGCGATACC GACCGCCAAT AACGGCAGCT TCTTAACCGT TGGCTGTAAA
GGCCATACTG GCTTAGAAAT TATCAAGCAT GCCGCCGAAG GTGCTGCTGC GATTATTTCT
GTCGGCACCT GCGCTTCCTT CGGTGGCGTG CAAGCCGCCT ACCCCAACCC GACTGGGGCA
AAAGGGGTAC ACGAAGTTGT GAGCAAGCCT GTGATCAACT TAGGTGGCTG TCCACCGAGT
GAGAAAAACA TCGTCGGCAC CCTGATGTAT TTCATCATGT TCGGCAAATT ACCTGCCCTG
GATATGTTTA ATCGTCCTAA ATGGGCTTAT GGCGCACGGG TACACGATAA CTGTGAACGC
CGCGGCCGTT TCGATGCTGG TGAATTCGTT GAAGAGTTTG GCGATCACGG TGCGAAGGAA
GGTTACTGCC TCTACAAAGT GGGTTGTAAA GGACCTTATA CCTATAACAA CTGCCCCACA
GAGCGCTTTA ACCACCATAC CAGCTGGCCA GTGTTAGCGG GCCACGGTTG TATGGGCTGC
TCAGAACCTA ACTTCTGGGA TGATATGGCC GACTTTGAAA AACCCCTTGG CCGTCAACTA
CTCCATGGAT TGGATGCGAC CGCAGACACA GTCGGTGCGG TGATTTTAGG CGCAACCGTC
GTCGGCATTG GAGCCCACGC CGTTGCCAGT ATTTTTGCCA AGCCGCTGGA GGAATAA
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| Protein sequence | MDTHAALYEQ GKARLDALRQ FAPRQQQTLT EKLQQHGITR RDFMKWSAMV TGMLALPLPF
SNLVAEAAEL ADRVPLIWLH MAECTGCSES LVRADTPNLD SLIFDHISLE YHETLMAAAG
WQAEENLEHA LETYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEIIKH AAEGAAAIIS
VGTCASFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL
DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT
ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT VGAVILGATV
VGIGAHAVAS IFAKPLEE
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