Gene Shewmr7_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2154 
Symbol 
ID4257635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2550301 
End bp2550783 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID638122822 
Productredoxin domain-containing protein 
Protein accessionYP_738199 
Protein GI114047649 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00992138 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAC CTTGTATGAA AAAACTCTTG TTGTTACTCA GTTTGTTAAG CGCTGGCGCC 
TATGCTGCAC CGTCGCTCGA TCACCAAGTC TTCGATGCAC AAAATCAAAG CGTTTCCTTG
ACCGAGTTTA AGGGCAAAGT GGTCTATGTC GATTTTTGGG CGTCCTGGTG TGGGCCGTGC
CGTAAGTCTT TCCCGTGGAT GAATGCGATG GCACAAAAGT ATCGAGAGCA AGGTCTAGCC
GTGGTGGCGA TTAACCTCGA TACCGATAAG GCGCTCGCCG ATGAATTTTT AAAGCAGCTT
CCTGCCCAGT TTTCGGTACG TTTTAATCCC GAAGGCGATG TGGCTCGAAG CTTCGATTTA
TTGGGGATGC CCAGCAGTTT TATGTTTAAC CGCCAAGGTG AGTTAGTCAA AAGCCATGTG
GGCTTTTATC AAGACAAAGC TGCCGACTAT GAACAAGAAC TCGTGAGTCT GTTAAAGGAG
TAA
 
Protein sequence
MDGPCMKKLL LLLSLLSAGA YAAPSLDHQV FDAQNQSVSL TEFKGKVVYV DFWASWCGPC 
RKSFPWMNAM AQKYREQGLA VVAINLDTDK ALADEFLKQL PAQFSVRFNP EGDVARSFDL
LGMPSSFMFN RQGELVKSHV GFYQDKAADY EQELVSLLKE