Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2154 |
Symbol | |
ID | 4257635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2550301 |
End bp | 2550783 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122822 |
Product | redoxin domain-containing protein |
Protein accession | YP_738199 |
Protein GI | 114047649 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00992138 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.309785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGAC CTTGTATGAA AAAACTCTTG TTGTTACTCA GTTTGTTAAG CGCTGGCGCC TATGCTGCAC CGTCGCTCGA TCACCAAGTC TTCGATGCAC AAAATCAAAG CGTTTCCTTG ACCGAGTTTA AGGGCAAAGT GGTCTATGTC GATTTTTGGG CGTCCTGGTG TGGGCCGTGC CGTAAGTCTT TCCCGTGGAT GAATGCGATG GCACAAAAGT ATCGAGAGCA AGGTCTAGCC GTGGTGGCGA TTAACCTCGA TACCGATAAG GCGCTCGCCG ATGAATTTTT AAAGCAGCTT CCTGCCCAGT TTTCGGTACG TTTTAATCCC GAAGGCGATG TGGCTCGAAG CTTCGATTTA TTGGGGATGC CCAGCAGTTT TATGTTTAAC CGCCAAGGTG AGTTAGTCAA AAGCCATGTG GGCTTTTATC AAGACAAAGC TGCCGACTAT GAACAAGAAC TCGTGAGTCT GTTAAAGGAG TAA
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Protein sequence | MDGPCMKKLL LLLSLLSAGA YAAPSLDHQV FDAQNQSVSL TEFKGKVVYV DFWASWCGPC RKSFPWMNAM AQKYREQGLA VVAINLDTDK ALADEFLKQL PAQFSVRFNP EGDVARSFDL LGMPSSFMFN RQGELVKSHV GFYQDKAADY EQELVSLLKE
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