Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2152 |
Symbol | |
ID | 4255286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2548637 |
End bp | 2549983 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122820 |
Product | hypothetical protein |
Protein accession | YP_738197 |
Protein GI | 114047647 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000767873 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.361147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATA ATAACAATAA GTTAGACCCA ATAGTCCCGC AAACGCAGCA AACTAAAGCA CAGACAAAAC AGATCGCCAG CGCGTTAGCT TTAGCCAGTT GTGGTTTGTT CGTGTCCAAT GGACACGCAA CCGAGCTTGC GAAAAATGTC GATGACTGGA AAGTCGATGC CGCACTCATG TATTACGGTG AGCAGGACAG AGTACAAGCG ATAGAAGCCA TTGGTACGGC GCAGAAAAAC TTTGGCGACG ACAGTGTGCT GGATTTAAAG CTGGTGGTCG ACAGCTTAAC TGGCGCCTCG GCCTCCGGTG CGGTCGCCCA AGGCGACAGC CAAACCTTCA CTCGTCCTTC CGGTAATGGC CAATATAAGG TAGCGGCCGG TGAAACCCCT CTCGATGATA CTTTCCACGA TACCCGAGTG CAGGGCAGTG CCAACTGGTC ACAGGCACTC AATCCCGATT GGAAAGTCAA TGGCGGCGTC TATGGTTCTA AAGAATTTGA CTATATGTCG ATGGGTATTA ATGCGGGAGT TGAGCGAGGT TTTAACAAGG ACAACACTAC ACTGTTTTTA GGCACGGCCT ACAGTTTCGA TGTGGTTGAC CCCGTTGGTG GCAGACCCGT GGCCTTATCT TCCATGGCCA TCCGCGATAA TTTTACCAGC GATGAGACTT ATCGCAGTGC ATTCGATGCC ACCCGTCAAA GTGGCAGTGA CGATAAACAA ACCGTCGACT TGATGCTGGG CATCACTCAA GTATTGAACC AACGCTGGTT ATTGCAGGCG AACTATGGCT TATCCAGTGT CAGCGGTTAT TTAACCGATC CCTACAAAGT CTTGAGTGTG GTCAATGACA ATGGTTTGAC TCAAGATACT GTCTATGAAA ACCGCCCCGA TTCGCGCCTG AAACACAGTT TTTATGTGAT GACTAAAGGG GCACTCGATT CGGGGGTAGT GGATTTCTCT TACCGCTATA ACACAGACGA TTGGGACTTA ACCTCGCACA CTTTAGAAAC CCATTATCGT TACTACTTTA GCGGCAGCTT CTATGGGCAA TTGCATTTAC GTTATTACCA ACAGTCGGCG GTGAACTTCT ATCAGCCGTT CTTGCTTGCT GATACGCCTC TGCCTGAGTT TGCTAGTGCC GATTATCGGA TTGGTGACAT GAGTGCCTAT ACGATTGGGG TCAAGTTTGG TCACCGTCTC TCGGGTGGTC ATGAGATGAC TTATCGCTTG GAATATTACC AACAGGATCC GAAAAACAAC GGCACAACAA TTCCAGGAGA GCTGCAAAAC TACGACTTAT TCCCGACACA AAAGGCAATA ACGGCGCAGT TTAGTTATTC ATTTTAA
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Protein sequence | MTNNNNKLDP IVPQTQQTKA QTKQIASALA LASCGLFVSN GHATELAKNV DDWKVDAALM YYGEQDRVQA IEAIGTAQKN FGDDSVLDLK LVVDSLTGAS ASGAVAQGDS QTFTRPSGNG QYKVAAGETP LDDTFHDTRV QGSANWSQAL NPDWKVNGGV YGSKEFDYMS MGINAGVERG FNKDNTTLFL GTAYSFDVVD PVGGRPVALS SMAIRDNFTS DETYRSAFDA TRQSGSDDKQ TVDLMLGITQ VLNQRWLLQA NYGLSSVSGY LTDPYKVLSV VNDNGLTQDT VYENRPDSRL KHSFYVMTKG ALDSGVVDFS YRYNTDDWDL TSHTLETHYR YYFSGSFYGQ LHLRYYQQSA VNFYQPFLLA DTPLPEFASA DYRIGDMSAY TIGVKFGHRL SGGHEMTYRL EYYQQDPKNN GTTIPGELQN YDLFPTQKAI TAQFSYSF
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