| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2151 |
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| Symbol | |
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| ID | 4255285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2547632 |
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| End bp | 2548534 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122819 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_738196 |
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| Protein GI | 114047646 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0607428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.340699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAG TTTCCCCTAA TGCGCCTTAT CGACTCCAAC GCCGAGAGTG GGGTTATTTA
GGAGAATTTA GGGCCATGGC GAGCCCCTGT GAGTTATTGA TCGCAAGCCA CGACGAAAGC
ATTGCCTACG ATATGCTCGA TATGGCAGCC CGTGAGGCGC TTAGAATCGA GCAAAAATAC
AGCCGCTTTA TTGAGGGCAA TTCTCTGTGG CGGCTTAATC ACGCCCAGGG TGAGCGCGTC
GGCATTGATG AGGAAACCTG GCAGTTGCTA GCTTTTGCCA AGCAATGCTT TGAGTTAAGT
GAAGGGCTAT TTGATGTATC TGCTTGCCCT CTAATGCAAG TATGGCGTTT TACGGCCGAT
GCCAAGATGC CCGCAAAGGC GGATATCGAA GCCGCGCGAG CCTTGGTCGG CTTTGAGCGC
ATCGAATTTA ATTCCCATGA GTTGTTGATG CCCAAAGGCA TGCAGCTCGA TTTTGGCGGT
ATCGCCAAAG AATATGCGGT CGATAGGGTC GCCTATGAGC TTGCCGAGTC CTATGCGGGG
ATTTCGGTAC TGGTCAATTT TGGCGGTGAT ATAGCTTGTC CAGTGGCAAA TGCCGTGCCT
TGGCAGGTGG GTATTGAAGA TCCGCATCAG CTCGACCATG CCGCGAAAGT GCTTGCCATG
ACTCAAGGCG CCCTAGCTAC CAGTGGTGAT ACACGGCGGT TTATTGAAGT CGAGGGTAAA
CGCTATGGAC ATATCGTCGA CCCGCGCACT GGCTATCCTG TGAGTGGGGC GCCGCGCTCG
GTGACGGTAC TTGGGCCAAA CTGCGTCACC GCGGGAATGT TAGCCACCAT GGCCATGTTA
CAGGGTGAAC AGGCCGAAAC TTTTTTAGCC GAGCAATCGA TTCAATTCAG TATTTTTCGA
TAG
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| Protein sequence | MPAVSPNAPY RLQRREWGYL GEFRAMASPC ELLIASHDES IAYDMLDMAA REALRIEQKY
SRFIEGNSLW RLNHAQGERV GIDEETWQLL AFAKQCFELS EGLFDVSACP LMQVWRFTAD
AKMPAKADIE AARALVGFER IEFNSHELLM PKGMQLDFGG IAKEYAVDRV AYELAESYAG
ISVLVNFGGD IACPVANAVP WQVGIEDPHQ LDHAAKVLAM TQGALATSGD TRRFIEVEGK
RYGHIVDPRT GYPVSGAPRS VTVLGPNCVT AGMLATMAML QGEQAETFLA EQSIQFSIFR
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