| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2146 |
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| Symbol | |
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| ID | 4255280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2539270 |
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| End bp | 2540946 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122814 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_738191 |
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| Protein GI | 114047641 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.582459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0836133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCTG TGAGTCGATT AGCGCTAAAT CCTAATACAC CAGACCGCAG CTTTCGTTCA
TCTAAGCGCT GGCCACTCGG CGCATTGTTG ATGGGACTTT CGCTTGCAGT CATAGAATCC
TATGCCGCCG AGTCACTCGT AACAGCACCT TTACGCGTTG AAGCAGAAAC GGTTGAGCAG
CCCGTTCTGA CGCCTCCCAC TGAAATCGCT GACCCAGACA CCTCAGTTGA GCAAATCCTA
GGGCAAACCC TACTCTTGAG TCTTGCCGAT GTTAGCCCGG TTTTTAGCGC CAATTATCAA
CAATTGATTA AGTGGCAGCA TAGAGTACTG GATAGCGAAG AGCGGACGAA GCTTCGCCAA
ATGCAGCTGC AACTGGATAA TTATTGGCAG TATCTCGATA CCCAAGCTGA ATGCATCACG
CCGTGCAGAT CGGCAGCACT GATGCCAACA GATGCGTATT TTCGCGCTGT GGTTCTCAAG
CTGAAGCAAT TGATGGCGTT AGCGGAATCC TCTTCGTGGG AGACGCTCAT CCTCGAAGAT
AAGCTCAGTC CAGGGCAAGA GAGTCCACTC ATTGCGCCGA TTGCACAGCG CCTTTTCCTA
TTAGGTTTTC TAGCAGAGAT GCCTAGCACG GCTTCCGAGT CAGTAGTCGA TAAAGCAGCT
TTGCCAGTAT CTGAGCTAGG ATCTGAGCCA GTCATTAAGT CAGACATCAT TTCACCAGAA
GCAACAAATC AAGCTGAAAC AGTTGCACGG ACTGAGCAGG CTGCAACTGA TAACAATCCC
ATGCGTTATG ATGATGAACT GGTTCGCGCG ATCAAAAACT TTCAAACCCA GCATGGCTTA
CAAGCAGATG GGGTGATAGG TAAGCAGACC CTGTATTGGC TCAATCAATC TCCCTATGCT
CGGGCAAAGC TGCTGGCGAA AAATACCCTT AGGCTGCAGA TTTTTACTCG CACCTTACCT
GCGAGCTATC TGGTGATAAA CATCCCTGCA TTTGAGTTGC AATTCGTCGA AGCGGGGAAG
GTTATCCTCA ATTCAAAAGT AATAGTGGGC AAAGCATCGC GGCCAACACC GCTGCTAAGT
AGTCATATCT CCAGCGTGGT GGTCAATCCA CAGTGGCGCG TGCCACGCAC CATAGTGCGG
CGCGATATCT TGCCCCATAT ACGCCAAGAT GGTCATTACC TGCAGGACCG CGGGTTCGAT
GTTTACGACT ATGACGGCGC GCGAGTCGAA CATTCGCCAC AGGAGTGGCA AGAGTTGGCG
TCCAGCCATT TTCCCTATCG TTTAGTGCAA CGCCCCGGGG CGAAAAACGC CTTAGGTCGG
TATAAATTTC ATTTCGACAA CAGTTTTAGT GTGTATTTGC ACGGAACTTC TGAGCCAAGT
CTCTTTAAAA AGACCGATAG GGCCTTATCA TCGGGTTGCA TTCGGGTTGA AAAGGTCGAG
GAGCTGGCCC GCTGGTTTCA GACTCACTTA GTTAAAGATA CGCGCCTTTG GGACAAATTA
ACGCCTAATA CCACTCAATC CCAATGGTTT GCGTTATCAG ATACCATGCC TGTCTACACG
GTTTATTGGA CAGCATGGCT TGATGATGCT GGGCAAATTC AATATCGCAA TGATATTTAT
CACTTAGAAG CTGAGTTTAG CCAGGCGGTG CCTGCATCAA TTTTTTACAT TCTATAA
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| Protein sequence | MMPVSRLALN PNTPDRSFRS SKRWPLGALL MGLSLAVIES YAAESLVTAP LRVEAETVEQ
PVLTPPTEIA DPDTSVEQIL GQTLLLSLAD VSPVFSANYQ QLIKWQHRVL DSEERTKLRQ
MQLQLDNYWQ YLDTQAECIT PCRSAALMPT DAYFRAVVLK LKQLMALAES SSWETLILED
KLSPGQESPL IAPIAQRLFL LGFLAEMPST ASESVVDKAA LPVSELGSEP VIKSDIISPE
ATNQAETVAR TEQAATDNNP MRYDDELVRA IKNFQTQHGL QADGVIGKQT LYWLNQSPYA
RAKLLAKNTL RLQIFTRTLP ASYLVINIPA FELQFVEAGK VILNSKVIVG KASRPTPLLS
SHISSVVVNP QWRVPRTIVR RDILPHIRQD GHYLQDRGFD VYDYDGARVE HSPQEWQELA
SSHFPYRLVQ RPGAKNALGR YKFHFDNSFS VYLHGTSEPS LFKKTDRALS SGCIRVEKVE
ELARWFQTHL VKDTRLWDKL TPNTTQSQWF ALSDTMPVYT VYWTAWLDDA GQIQYRNDIY
HLEAEFSQAV PASIFYIL
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