| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2141 |
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| Symbol | |
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| ID | 4255275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2531537 |
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| End bp | 2533312 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122809 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_738186 |
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| Protein GI | 114047636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0240429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG ATAACTTGTT AACGCTTTCA GTGAACGGGG TCGACGAAGC CCTAAAGCGT
AATATTCTCG CCCACTTAGG TGCTATGCCA GACTCCGAAG TGCAGCGCCG AGCCTTCTTA
TTTAACGTGG AAGACAATGT CTCCACCGCC CTCGAGTCCA TGGGCTATTA CCATGGCGAA
GTGGAAGAAC AGTTAGTCGA AAAAGACAAA GGCCCGTGGG AACTCAAACT CACGGTCAAA
GCGGGTGAGC CAGTTAAAGT CCAATGGGTC GACATTAATT TTTCCGGCGA GATGCTTGAC
GATCGCGCCT TCGATAAGTG GCTTGCACAG GTGAATATCA AGCCTGGGGA TACGCTCAAC
CATGGGGTGT ATTCCGATGT AAAATCCCAA CTGGTGACGC TTGCCCTCGC GAGGGGGTAT
TTCGATGGCG AATTCACCGA GTCGCAAATC AAAATCAACC GAGATTTAAA CACGGCGCAA
ATTAGCCTGC ATTTTAATTC AGGTGCCCGC TACCATTTTG GACAAGTGAG CTTTGAAGGC
CACACCTTAG AGCCGGATAT TCTCACTAAG CTTATTCCTT TCAAAGAAGA TGCGGCCTAT
TCGACCCGTC GGGTCAGCGC CCTAAACCGC CAGTTGTTGG ATACGGGTTA TTTCGCCAAT
ATCAAGGTCA TACCGCAAAT TGATCAGGCA AAGGATAATC AACTCCCCGT CAAGGTGGAG
CTCACCAATA AGGCCAGCCA CTCGATTGAA TTAGGTCTCG GTGGCGACAT AGGCCAAAGC
GCCGATAAAA CCTTCGATCC TAGGGTGCGG GTCACTTGGC GCACACCACA AGTCAATAAA
TACGGTCATT CTCAAGAGAC CAGTTTGGAA TGGTCGCCTG ACAGACCAAA GTTTTTAACC
ACTTATACGA TCCCGCTGAC TCATCCCTTA GACGATCAAC TAAAAGTTCG TTTAGGCTTG
CTGCGGGATA AATATGGGGT CACTCAAATT TACGAGCCCG AGAACCGTGA TTTTCGTAAT
ACGGGCCAAC TGGAATCGAC CAAGTATTTA CTCGGGCTAC TCAGGCAACA ACGTTTAGAT
AATCAATGGT TAATGAGTTA TTCCCTCGAT GCAATTCGCG AGGAATATAC CCAGTCTGAC
ATTGATTACA GCCCCACTTT CTATCTGGCG GGGATTAACT TCTCTAAAAC TACCCGCGGA
GATAACTCCC TCGATCCTAA GTCCGGTTTT AGGCAAATAT ACAGTCTAGA TTATGCCGAT
CCCTATCTTG GCTCAGAGAC GCGTCTTGCC CGCTTACAGG CCAAGTTTAA GTGGATTGAC
ACCTTTTTTG ATAACCACAG AATCGTGGCG CGTATGGATT TAGCGGCCAA CCTTGCCAAT
GAAAATGAGC TGGCTTTTAT TCCGCCGTCG CTGCGCTATT TTGCCGGTGG CGATCAAACC
ATCCGTGGTT ATGGCTATCA GGAACTTGGG CCTTATCTCG ATTACATCGA TGCCGATGGC
AAAGTCAATC GCGAGGTTAT CGGTGGCCGT TATTTGATGG TCGGTAGTTT GGAATATCAA
TATTACGTTA CCCCCACTTG GCGTGTTGCC ACCTTTGTGG ATGCGGGTAA CGCCTTTGAT
AACAATCAGT TTGAGCCTGT AGTCTCAGTG GGTGGTGGTA TCCATTGGAT CTCGCCCATT
GGTCCAATTA AGTTAGATTT AGGGGTAGGT TTGAAAGAGA CAGACACCAT CGACCGCTCA
TGGCGCATTC ACTTAACCAT GGGGACAGAA CTATGA
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| Protein sequence | MAADNLLTLS VNGVDEALKR NILAHLGAMP DSEVQRRAFL FNVEDNVSTA LESMGYYHGE
VEEQLVEKDK GPWELKLTVK AGEPVKVQWV DINFSGEMLD DRAFDKWLAQ VNIKPGDTLN
HGVYSDVKSQ LVTLALARGY FDGEFTESQI KINRDLNTAQ ISLHFNSGAR YHFGQVSFEG
HTLEPDILTK LIPFKEDAAY STRRVSALNR QLLDTGYFAN IKVIPQIDQA KDNQLPVKVE
LTNKASHSIE LGLGGDIGQS ADKTFDPRVR VTWRTPQVNK YGHSQETSLE WSPDRPKFLT
TYTIPLTHPL DDQLKVRLGL LRDKYGVTQI YEPENRDFRN TGQLESTKYL LGLLRQQRLD
NQWLMSYSLD AIREEYTQSD IDYSPTFYLA GINFSKTTRG DNSLDPKSGF RQIYSLDYAD
PYLGSETRLA RLQAKFKWID TFFDNHRIVA RMDLAANLAN ENELAFIPPS LRYFAGGDQT
IRGYGYQELG PYLDYIDADG KVNREVIGGR YLMVGSLEYQ YYVTPTWRVA TFVDAGNAFD
NNQFEPVVSV GGGIHWISPI GPIKLDLGVG LKETDTIDRS WRIHLTMGTE L
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