Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2133 |
Symbol | |
ID | 4255548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2520859 |
End bp | 2521446 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122801 |
Product | periplasmic nitrate reductase subunit NapC |
Protein accession | YP_738178 |
Protein GI | 114047628 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000264012 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGATA AACTCAAAAA GATCTGGCAA GTTCTCAATC GTCCGAGTGT GCACTACAGT TTAGGGTTTT TAACCTTAGG TGGCTTTGTG GCGGGGGTGA TCTTCTGGGG GGGCTTTAAC ACCGCGCTTG AAGCCACCAA CAAAGAGGCC TTCTGTATCG GTTGCCACGA AATGGAAAAT AACGTCTATC AAGAGTTACA GTCGACTATC CATTTCACTA ACCGCAGTGG TGTGCGTGCG ACTTGTCCTG ACTGCCACGT GCCGCACAAC TGGACCGATA AGATTGCCCG TAAGATGCAG GCATCGAAAG AAGTGTGGGG TAAAGTGTTT GGTACCATCA ATACCCGCGA AAAGTTTGAG AACAAACGTC GCGAGCTGGC CGAACATGAA TGGGAACGGT TAAAGGCAAA CGACTCGCTT GAGTGCCGTA ACTGCCATAA CTTTACCTAC ATGGACTTTA CCAGACAGTC GCCACGCGCC GCCCAGATGC ACTCAACATC TTTGGCCAGT GGTGAGAAAA CCTGTATCGA TTGCCATAAA GGGATTGCCC ACCATCTTCC CGATATGGCA GGGGTTGAAG GCTTCTAA
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Protein sequence | MLDKLKKIWQ VLNRPSVHYS LGFLTLGGFV AGVIFWGGFN TALEATNKEA FCIGCHEMEN NVYQELQSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTREKFE NKRRELAEHE WERLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK GIAHHLPDMA GVEGF
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