| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2132 |
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| Symbol | |
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| ID | 4255547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2519672 |
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| End bp | 2520631 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638122800 |
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| Product | integron integrase |
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| Protein accession | YP_738177 |
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| Protein GI | 114047627 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000290373 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTAA AAAGCCCATT TCTAAGCAGC CTTCAAGAAG AAATGCGTAT GCGTGGTTAC
AGTATTAGAA CAGAAACAAC CTATCTGTAT TGGATCAAGG CCTTTATTAA CTTTCACGGC
AAGCGTCACC CTGAAACAAT GGGAACGGAA GAAGTTACAC AATTTTTAAC CTTCCTTGCC
AATCAACGAA ATGTGGCCAT CAACACACAA AAAATTGCAC TTAACGCGTT AGCCTATTTG
TATCAGAAGC ATTTGCACCA TGAGCTTGGG GATTTAGGTT TTTGCTATGC CACTAAACAG
AGACATTTAC CGACAGTGTT ATCCCCATCA GAAATCTCAC TAATACTAAA TGAACTTGAT
GGCCGCGATA AGCTAATAAT AGAACTACTC TATGGTAGTG GACTAAGAGT GTCAGAATGC
CTCAGGTTAC GTATCCAAGA TATTGATATT GAGAGAGCTT CGCTGAGCGT TAGAGACGGT
AAAGGACATA AAGATAGGCA AACCATCCTC AGCCATAGAT GCGCAGAAAA GCTCACTACA
TATATTGAAA AGGCTATTAA GACTCAACAG AATGACAACC TTCGAGGGAT AGGTCCATCT
CTGCCAAATG CATTAGAACG CAAGTATCCC AATGCGTTTA GGCAACACGG ATGGATGTTT
ATTTTCCCTT CTAGTACAAC CTGTATCAAT CCTTATACAG GAACACTTTG CAGGCATCAT
TTACATCAAA GTGTTATTCG TAAAGCGCTC GGGAATGCCG TGCGTAATAT TCAAATGAAT
AAACGCGTCA CCTGCCATAC GTTTAGGCAT AGCTTCGCAA CCCATTTGCT TCAAGCTGGT
CGTGATATAA GAAGTGTTCA AGAGTTACTG GGCCACAACG ACGTTAGTAC CACACAAATC
TATACACATG TACTTGGCCA ACATTTTGCG GGGATAACTT GCCCGTTAGA CACATTATAA
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| Protein sequence | MSLKSPFLSS LQEEMRMRGY SIRTETTYLY WIKAFINFHG KRHPETMGTE EVTQFLTFLA
NQRNVAINTQ KIALNALAYL YQKHLHHELG DLGFCYATKQ RHLPTVLSPS EISLILNELD
GRDKLIIELL YGSGLRVSEC LRLRIQDIDI ERASLSVRDG KGHKDRQTIL SHRCAEKLTT
YIEKAIKTQQ NDNLRGIGPS LPNALERKYP NAFRQHGWMF IFPSSTTCIN PYTGTLCRHH
LHQSVIRKAL GNAVRNIQMN KRVTCHTFRH SFATHLLQAG RDIRSVQELL GHNDVSTTQI
YTHVLGQHFA GITCPLDTL
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