Gene Shewmr7_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2123 
Symbol 
ID4255538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2512353 
End bp2513183 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content52% 
IMG OID638122791 
Productalpha/beta hydrolase fold 
Protein accessionYP_738168 
Protein GI114047618 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.412554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000231398 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTT CTTCACACAG AAAACAACTC AACATCGCCG GTAGCCAACT CAGTTACCTC 
GATATAGGTT CAGGCCCAGC GCTGTTATTT GGTCACAGTT ACCTCTGGGA TAGCGCCATG
TGGGCGCCGC AAATTGCCAG CTTAAGTCAA TACTACCGCT GCATCGTGCC TGAGCTCTGG
GGACACGGCC AATCGGGCGC AGTCCCAGAA AGCTGCAACA GCCTCTTAGA CATCAGCGAG
CATATGCTGA CCCTGATGGA TAGCCTCAAT ATCGAGCAAT TTGCGGTTAT CGGTTTATCC
GTGGGTGCAA TGTGGGGCGC CGAGCTCGTG CTTAAAGCCC CCGCGCGCGT CAATGCACTG
GTGATGCTCG ACAGTTTTAT TGGGTTTGAG CCAGAGATCA CCCGCGCTAA ATATTATGGC
ATGCTGGACA TGATCCAAGC CGCCGGCAAC ATACCTGCAC CACTTATCAG CGCTATTTCA
CCGCTGTTTT TCGCCGATAA TGCCAAAGCG AATAATCCCG AATTAGTGCA GCGTTTTGAG
GCCTACTTGG CCGCGCAAAC GCCAGAGACT ATCCCGAGCA TAGTAAAACT TGGCCGAATG
ATTTTTGGCC GCCGCGATAC GATGGAATTT GCCGAGCAAT TGACTCTGCC CTGTTTAGTC
ATGGTCGGAG TCGAAGACAA GGCCCGCAGC GTGCTTGAGA GTTACCTGAT GAGCGATGCC
ATCGACGGCA GTCAATTAGT GCACATTCCT AACGCTGGGC ATATTTCCAG CCTAGAGCAA
GCCGACTTTG TCACTGAGCA TTTAACTCAG TTTTTAGCGA AGGTATTGTA A
 
Protein sequence
MDFSSHRKQL NIAGSQLSYL DIGSGPALLF GHSYLWDSAM WAPQIASLSQ YYRCIVPELW 
GHGQSGAVPE SCNSLLDISE HMLTLMDSLN IEQFAVIGLS VGAMWGAELV LKAPARVNAL
VMLDSFIGFE PEITRAKYYG MLDMIQAAGN IPAPLISAIS PLFFADNAKA NNPELVQRFE
AYLAAQTPET IPSIVKLGRM IFGRRDTMEF AEQLTLPCLV MVGVEDKARS VLESYLMSDA
IDGSQLVHIP NAGHISSLEQ ADFVTEHLTQ FLAKVL