Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2123 |
Symbol | |
ID | 4255538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2512353 |
End bp | 2513183 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122791 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_738168 |
Protein GI | 114047618 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.412554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000231398 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTTT CTTCACACAG AAAACAACTC AACATCGCCG GTAGCCAACT CAGTTACCTC GATATAGGTT CAGGCCCAGC GCTGTTATTT GGTCACAGTT ACCTCTGGGA TAGCGCCATG TGGGCGCCGC AAATTGCCAG CTTAAGTCAA TACTACCGCT GCATCGTGCC TGAGCTCTGG GGACACGGCC AATCGGGCGC AGTCCCAGAA AGCTGCAACA GCCTCTTAGA CATCAGCGAG CATATGCTGA CCCTGATGGA TAGCCTCAAT ATCGAGCAAT TTGCGGTTAT CGGTTTATCC GTGGGTGCAA TGTGGGGCGC CGAGCTCGTG CTTAAAGCCC CCGCGCGCGT CAATGCACTG GTGATGCTCG ACAGTTTTAT TGGGTTTGAG CCAGAGATCA CCCGCGCTAA ATATTATGGC ATGCTGGACA TGATCCAAGC CGCCGGCAAC ATACCTGCAC CACTTATCAG CGCTATTTCA CCGCTGTTTT TCGCCGATAA TGCCAAAGCG AATAATCCCG AATTAGTGCA GCGTTTTGAG GCCTACTTGG CCGCGCAAAC GCCAGAGACT ATCCCGAGCA TAGTAAAACT TGGCCGAATG ATTTTTGGCC GCCGCGATAC GATGGAATTT GCCGAGCAAT TGACTCTGCC CTGTTTAGTC ATGGTCGGAG TCGAAGACAA GGCCCGCAGC GTGCTTGAGA GTTACCTGAT GAGCGATGCC ATCGACGGCA GTCAATTAGT GCACATTCCT AACGCTGGGC ATATTTCCAG CCTAGAGCAA GCCGACTTTG TCACTGAGCA TTTAACTCAG TTTTTAGCGA AGGTATTGTA A
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Protein sequence | MDFSSHRKQL NIAGSQLSYL DIGSGPALLF GHSYLWDSAM WAPQIASLSQ YYRCIVPELW GHGQSGAVPE SCNSLLDISE HMLTLMDSLN IEQFAVIGLS VGAMWGAELV LKAPARVNAL VMLDSFIGFE PEITRAKYYG MLDMIQAAGN IPAPLISAIS PLFFADNAKA NNPELVQRFE AYLAAQTPET IPSIVKLGRM IFGRRDTMEF AEQLTLPCLV MVGVEDKARS VLESYLMSDA IDGSQLVHIP NAGHISSLEQ ADFVTEHLTQ FLAKVL
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