| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2121 |
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| Symbol | |
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| ID | 4255536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2510336 |
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| End bp | 2511481 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122789 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_738166 |
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| Protein GI | 114047616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000264012 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCACG CTTCGAACAC CCACCCAGTT ACCGAACTGA CTAAAGAATT AATCGCCCGT
CCCTCTGTCA CCCCGCTGGA TGAAGGCTGC CAAACCCTGA TGGCCGAACG TCTTGCCGCC
ATTGGCTTTA ATATTGAGCC CATGGTCTTT GAAGACACCA CCAATATGTG GGCGCGTCGC
GGTAATGAAG GCCCAGTATT TTGTTTTGCC GGCCATACCG ATGTAGTGCC CGCGGGCGAT
TTAAGCCGCT GGCATACCCC GCCTTTTGAG CCAACCATTA TCGACGGTTA CCTCTATGGC
CGCGGCGCCG CCGACATGAA AGGCTCGCTG GCGGCGATGA TCGTCGCGAC CGAACGTTTT
GTGGCTAAGC ACCCAAATCA CCCCGGCTCG ATTGCGTTTT TGATCACTAG CGATGAAGAA
GGCCCCTTTA TCAATGGCAC CACGCGGGTT ATCGATACCC TAGAAGCCCG TAATGAAAAA
ATCACTTGGG CACTGGTGGG CGAACCCTCA TCGACCCTAA AACTCGGTGA TGTGGTCAAA
AATGGACGCC GTGGCAGCCT GACCGCCAAC TTAACCGTTA AGGGCATTCA GGGCCATGTG
GCCTATCCGC ACCTTGCGGA TAACCCTATC CACAAAGCCG CGCCGTTTTT AGCCGAGTTA
AGCCAAACCC ATTGGGATAA TGGCAACGAA TTCTTCCCGC CCACCAGCAT GCAAATCGCC
AATATTAACG GCGGCACGGG CGCATCAAAC GTGATCCCAG GCACCCTAGA GGTGATGTTT
AACTTCCGTT ATTCAACCGA AGTGACCGCC GAGATATTAA TCGAGCGCGT GGAAGCCTTA
TTGACCGCCC ACGAACTGGA TTATGACATC AGCTGGACCT TCAACGGCCT GCCATTTTTA
ACTGGCGAAG GCCCACTGTT AGACGCGACT CGACATGCTA TACGTCAGAT CACTGGCTAT
GATACCGATC CGCAAACCAC GGGCGGCACC TCTGATGGAC GCTTTATTGC ACCAACGGGC
GCCAAAGTGT TGGAACTCGG TCCAGTGAAC GCCACTATCC ATAAAGTGAA CGAGTGCGTG
AAGATCGACG ATCTCGAGCA GTTAGCCCTG TGCTACGAAG TGATTTTGGA ACAATTACTG
TGTTAA
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| Protein sequence | MTHASNTHPV TELTKELIAR PSVTPLDEGC QTLMAERLAA IGFNIEPMVF EDTTNMWARR
GNEGPVFCFA GHTDVVPAGD LSRWHTPPFE PTIIDGYLYG RGAADMKGSL AAMIVATERF
VAKHPNHPGS IAFLITSDEE GPFINGTTRV IDTLEARNEK ITWALVGEPS STLKLGDVVK
NGRRGSLTAN LTVKGIQGHV AYPHLADNPI HKAAPFLAEL SQTHWDNGNE FFPPTSMQIA
NINGGTGASN VIPGTLEVMF NFRYSTEVTA EILIERVEAL LTAHELDYDI SWTFNGLPFL
TGEGPLLDAT RHAIRQITGY DTDPQTTGGT SDGRFIAPTG AKVLELGPVN ATIHKVNECV
KIDDLEQLAL CYEVILEQLL C
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