| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2110 |
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| Symbol | |
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| ID | 4258096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2493230 |
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| End bp | 2494042 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122778 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_738155 |
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| Protein GI | 114047605 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0650904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGATG TTATTTCTAA AGCGACAATG TTGGCACCCA GCCAATTTGC ATTTACGTTA
GACGCAAATC GTCCCGTATT GAGTAATGCG CGCAATCTCG AGGCCGAAAT GGGCGTCGAA
CCCCATTCTC ACCCACGGGG GCAGTTACTT TGGGCGGCAA AAGGGATTTT ACGGGTACAG
AGCGACAATG CGGTTTGGGT GGTGCCATCG ACCCATGCCG TGTGGCTCCC CAGTGGTTGC
CGACATCAAA TTAACTGTGA AACCCATGCC CATCTTCGCA ACTTGTATAT CGATCCCAGT
TATCGCGTAA GAGTGCAGGA CACACAGGTG GTGATGGTTA CTATGACGCC GCTAATGCGT
GAAATGGTGC TGAAGCTATG TCAAAACACC TCGATGGAGC CCGCAAAATA TTTCCGCTTG
GGCTTAAGTG CCATTGACGA GCTAGATACA CTCGACAGTG TGAATACCTA TTTGAATGCG
GGCTCGGATC CGCGTCTTGG CCGAGTGATC CAACTATTGA TCAAAAAACC GCAGGCAGAA
TATACCTTGG CCGAATTAGC CCAAGGCGCT GGGGCGAGTA TCAGAACCAT AGAACGACTC
TTTAAAGCCG AAACCGGGCA GACCTATAGA CAATGGCGTC AAAGGTACCG ATTACTCAAC
TCCCTTGAGC GGTTAACCCA AGGGGAGAGC ACGACGGGCG TGGCCCATAG TCTGGGGTAT
TTGAGTGTCA GTAGCTTTAG CGCAGCATTT AAAGCCTTAT TTGGTTGCAC GCCACAGGAA
TACGCCCAAA AAAGCGTGCA AGCCACGCGG TAG
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| Protein sequence | MSDVISKATM LAPSQFAFTL DANRPVLSNA RNLEAEMGVE PHSHPRGQLL WAAKGILRVQ
SDNAVWVVPS THAVWLPSGC RHQINCETHA HLRNLYIDPS YRVRVQDTQV VMVTMTPLMR
EMVLKLCQNT SMEPAKYFRL GLSAIDELDT LDSVNTYLNA GSDPRLGRVI QLLIKKPQAE
YTLAELAQGA GASIRTIERL FKAETGQTYR QWRQRYRLLN SLERLTQGES TTGVAHSLGY
LSVSSFSAAF KALFGCTPQE YAQKSVQATR
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