| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2108 |
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| Symbol | |
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| ID | 4258094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2488801 |
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| End bp | 2490396 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122776 |
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| Product | major facilitator transporter |
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| Protein accession | YP_738153 |
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| Protein GI | 114047603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.753085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGG ATCAACAAAC GGTTACCCCA TTAGAGAATT TCTCGCCCAA GGTGGCGCAG
CGCGCCGTGC ATAGGGTGCA ACCCGAGCTG AATTTCTGGC AAATCTTCAA TATGTGCTTT
GGCTTTTTGG GGATCCAATT TGGCTTTGCA CTGCAAAATG CCAACGTCAG CCGCATTTTC
CAAACCCTTG GCGCCTCTAT CGATGATATT CCTATCCTGT GGATTGCCGC GCCGTTAACG
GGTCTGCTGG TTCAACCTAT TATTGGTTAT CTGAGCGATA ACACTTGGGG GCGTTTAGGT
CGCCGCCGGC CATATTTTTT AATCGGCGCC ATTTGTACGA CTCTCGCAAT TTTTGTGATG
CCGCATTCCC CTACGTTGTG GATTGCCGCA GGCATGCTGT GGATTATGGA TGCCTCAATC
AATATCGCCA TGGAACCCTT CCGTGCCTTT GTGGGGGATA ATTTACCCCC CAAGCAGCGC
ACCCAAGGCT ATGCTATGCA AAGCTTTTTT ATCGGCATCG GCGCGGTTGT GGCCTCGGCC
CTGCCCTATA TTCTCAGCAA CTTCTTTGCT GTCGCCAATA CCGCGCCCGC GGGCGAAATA
GCCGATTCGG TGCGTTATGC CTTCTATTTT GGCGGTGCAG TGCTGTTTCT TAGCGTGGCT
TGGACTGTTG TGTCTACCAA AGAATATTCC CCCGATGAAC TTGCCGCCTT CCATGGCAAT
GCTGACGCAG GCATAGATGA GCAACAAAAC CGCACACGCA CCCACAAGAA TTATCAATTT
GCCGCGATCG TTTGGATGGC CGTAGGCGCA CTGCTGACGC TTGCGGTGTG GACACAGGAT
TTAGATAAGC AGCTGTATAT TTTAACCTTA GGGATTTTTG CCTTTGGCCC ATTGCAACTT
TACTGCGCCC TGCGTTTAGG CAAATCTACG CCCTCACAGC GCGCGCAACT GGGCATAGTC
TTTAATGTGG TCGATGATTT ATTCCATATG CCTAAGGCCA TGCATCAGTT AGCAATAGTG
CAGTTTTTCT CTTGGTTCGC GCTCTTTGCG ATGTGGATTT ACACCACTTC GGCGGTGACG
TCCTACCATT TTGGCAGCAG CGATGTGTTG TCTAAGGCCT ATAACGATGG TGCCGATTGG
GTGGGCGTAC TGTTCGCCTC CTACAATGGA TTTTCGGCCA TTGCGGCCCT GTTTATCCCA
CTGCTTGCTA AACGTATCGG CATCAAACTG ACCCACACCT TTAATATGCT CTGCGGAGGT
TTTGGGTTGA TCAGTTTCTA TTTTATCAAA GATCCCAGTC TGTTATGGCT GCCCATGATT
GGCGTGGGTA TCGCCTGGGC CTCGATTCTC TCCGTGCCCT ACGCCATGTT ATCTGGCGCC
TTACCGCCGA AAAAGATGGG CGTGTATATG GGGATTTTTA ACTTCTTTAT CGTGATCCCA
CAGCTGCTCG CAGCCAGTGT TTTAGGCTTA ATTCTTAATG GATTATTTGA TGGTCAGCCC
ATCTACGCCC TGATCACTGG CGGCGTGCTG ATGCTCTGCG CCGGGATTGC CGTGCTCTTT
GTTGAGCAAC CGAATACTCA GCACACTCAA GCGTAA
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| Protein sequence | MSADQQTVTP LENFSPKVAQ RAVHRVQPEL NFWQIFNMCF GFLGIQFGFA LQNANVSRIF
QTLGASIDDI PILWIAAPLT GLLVQPIIGY LSDNTWGRLG RRRPYFLIGA ICTTLAIFVM
PHSPTLWIAA GMLWIMDASI NIAMEPFRAF VGDNLPPKQR TQGYAMQSFF IGIGAVVASA
LPYILSNFFA VANTAPAGEI ADSVRYAFYF GGAVLFLSVA WTVVSTKEYS PDELAAFHGN
ADAGIDEQQN RTRTHKNYQF AAIVWMAVGA LLTLAVWTQD LDKQLYILTL GIFAFGPLQL
YCALRLGKST PSQRAQLGIV FNVVDDLFHM PKAMHQLAIV QFFSWFALFA MWIYTTSAVT
SYHFGSSDVL SKAYNDGADW VGVLFASYNG FSAIAALFIP LLAKRIGIKL THTFNMLCGG
FGLISFYFIK DPSLLWLPMI GVGIAWASIL SVPYAMLSGA LPPKKMGVYM GIFNFFIVIP
QLLAASVLGL ILNGLFDGQP IYALITGGVL MLCAGIAVLF VEQPNTQHTQ A
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