| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2097 |
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| Symbol | |
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| ID | 4258364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2475170 |
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| End bp | 2477332 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122765 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_738142 |
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| Protein GI | 114047592 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTT TAGAATCGTC CTCAGAATCG ATTGCCGTTA ATGCCCAAGG GCAAACGAGC
CGCCGTGCGG CGCGCGCCCA GGCGCAAGCC TTTATCGATA CCCTTAAACC ATTACAACAC
CCTAATTCGC AAAAGTTATA TTTGCAGGGA AGCCGTGAGG ATCTCCGTGT CGGGATGCGG
CAAATTCTGC AAACCGATAC ACGGATTGGC GGTACAGCGA CCGCGCCCAT AGTCGAGAAA
AATCCTCCCA TTCCTGTGTA TGACTGCGCC GGTCCTTATT CCGATCCGGC TGCGCAAATT
AACGTGCGCC AAGGTTTAGC CAAACTCAGA TTACCTTGGA TTATCGAGCG CCAAGATACC
GAAGTGCTTG ATTGTGCGAC CTCAGATTTT ACCCAGCAAC GCCTGAAGGA TGATGGACTC
GATCATCTGC GTTTCGAAGC CGGCTCAAGT GCGATTGTTC GTCCTCGCCG TGCCTTACCG
GGTAAACGCG TGAGCCAATT ACACTATGCC CGCCAAGGGA TTATTACCCC CGAAATGGAG
TATGTGGCGA TTCGGGAAAA TATGGCGCTC GCCGAGGTAC AGGACGAAAT CTTAAACCGC
CGCGGCCAAG GTGAATCCTT CGGCGCTGTG ATTGGTAAAC CGATTACCCC AGAGTTTGTC
CGCGATGAAA TTGCCCGTGG CCGCGCCATT ATTCCGTTAA ATATCAATCA TCCAGAAGCC
GAGCCTATGA TTATTGGTCG TAACTTTCTA GTGAAAGTGA ATGCCAATAT CGGTAACTCG
GCGGTCACGT CCTCCATTGA GGAGGAAGTC GAAAAGCTAG TCTGGTCAAC CCGTTGGGGC
GCAGACACTG TGATGGACTT GTCCACTGGG CGCTATATCC ATGAAACCCG CGAATGGATC
ATCCGCAACT CGCCAGTGCC TATTGGCACA GTGCCGATTT ATCAAGCACT TGAAAAAGTG
AATGGGGTTG CAGAACACCT GACCTGGGAA GTGTTTCGCG ATACCTTGAT TGAGCAAGCG
GAGCAGGGCG TCGATTACTT TACCATCCAC GCGGGCGTGT TATTGCGCTA TGTGCCCATG
ACCGCCAAAC GGGTGACTGG AATTGTGTCC CGCGGCGGCT CGATCATGGC CAAATGGTGC
TTGAGCCACC ATCAAGAAAA CTTCCTCTAT ACCCATTTCC GTAAGATTTG CGAGCTGTGC
GTTGCCTACG ATGTGTCGCT GTCTTTAGGC GATGGTATGC GTCCAGGCTC GATTGCCGAT
GCCAATGATG AGGCGCAGTT TGCCGAGCTT GAGACCTTAG GCGAGTTGGT CAAAATCGCT
TGGGAATACG ATGTGCAGAC CATTATCGAA GGGCCTGGGC ATATCCCGAT GCAGCTTATC
AAAGAGAATA TGGAGAAGCA GCTTATTCAC TGTGCCGAGG CGCCGTTTTA TACTCTAGGT
CCACAAATTA CTGATATTGC GCCGGGTTAC GATCATTTCA CCTCAGGGAT AGGTGCGGCG
ATGATCGCAT GGTATGGCTG CGCCATGCTC TGCTATGTGA CGCCGAAAGA ACACTTAGGT
CTACCCAATA AGCAAGATGT CAAACAAGGG CTGATTGCCT ACAAGATTGC CGCCCATGCG
GCCGATATTG CAAAAGGCCA CCCGGGCGCG CAGATCCGCG ACAATGCATT ATCCAAGGCG
CGCTTTGAAT TCCGTTGGGA AGATCAATAT AACCTAGGAC TCGACCCTGA TACCGCGCGT
GCCTATCACG ATGAATCCCT GCCACAGGAG TCGGCCAAGG TTGCGCACTT TTGCTCTATG
TGTGGCCCTA AGTTTTGCTC GATGAAGATA ACCCAAGATG TACGTGACTA TGCGGCAAGT
TTAACGGCGG GTACGTTGTC AGTGGCTTCA TCAAACCAAA ATGTTGAGAG CGCTGAAGCG
CTTGCATCGA TAAACCCTGC TCAGCAAGGG CAATCAAACA CAGAAGCAAT CCAGCAGATC
AGAGTCAAAA CTCAAGATGA ATTAGCGGCG GCCATGGCGC AAAAATCGGC TGAGTTTGCG
GCCTCGGGCG CCAAACTGTA TCTGCCGCTG GGCGATGCTA ATGCAGCTAA TACAGCAAAT
GAATCGGCCA AGCAGCAGGA TGGGACAGAG CTCAAACCAA CAGCACAGGT TGCGGAGGTT
TGA
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| Protein sequence | MSSLESSSES IAVNAQGQTS RRAARAQAQA FIDTLKPLQH PNSQKLYLQG SREDLRVGMR
QILQTDTRIG GTATAPIVEK NPPIPVYDCA GPYSDPAAQI NVRQGLAKLR LPWIIERQDT
EVLDCATSDF TQQRLKDDGL DHLRFEAGSS AIVRPRRALP GKRVSQLHYA RQGIITPEME
YVAIRENMAL AEVQDEILNR RGQGESFGAV IGKPITPEFV RDEIARGRAI IPLNINHPEA
EPMIIGRNFL VKVNANIGNS AVTSSIEEEV EKLVWSTRWG ADTVMDLSTG RYIHETREWI
IRNSPVPIGT VPIYQALEKV NGVAEHLTWE VFRDTLIEQA EQGVDYFTIH AGVLLRYVPM
TAKRVTGIVS RGGSIMAKWC LSHHQENFLY THFRKICELC VAYDVSLSLG DGMRPGSIAD
ANDEAQFAEL ETLGELVKIA WEYDVQTIIE GPGHIPMQLI KENMEKQLIH CAEAPFYTLG
PQITDIAPGY DHFTSGIGAA MIAWYGCAML CYVTPKEHLG LPNKQDVKQG LIAYKIAAHA
ADIAKGHPGA QIRDNALSKA RFEFRWEDQY NLGLDPDTAR AYHDESLPQE SAKVAHFCSM
CGPKFCSMKI TQDVRDYAAS LTAGTLSVAS SNQNVESAEA LASINPAQQG QSNTEAIQQI
RVKTQDELAA AMAQKSAEFA ASGAKLYLPL GDANAANTAN ESAKQQDGTE LKPTAQVAEV
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