| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2096 |
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| Symbol | |
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| ID | 4258363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2473470 |
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| End bp | 2475167 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122764 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_738141 |
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| Protein GI | 114047591 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAG CTAAACATAT TAGCCTGGTG GCGCCTAAAC CTATCGTCTG GACCATTGCC
GGTTCAGACA GTGGTGGCGG CGCGGGGATC CAAGCCGACT TAGCCACCAT CAAGGATTTG
GGCGGCCATG GATGCAGCGT GATCACCACG TTAACGGCCC AAAGTTCGGT GGCGGTGGCG
TTAGTTGAGC CCGTGAGTGA GGCAATTTTA CTCACACAGC TCTCGACCCT GTTAGCCGAT
CTACCGCCTC AGGCGATTAA GATTGGTTTA CTCGCAAATC AGCAGCAAGT GCACTTAGTT
GCCGATTGGT TGGCTGGTTT TAAAACCCAA TTTCCGCTCG TCCCTGTTAT TCTCGACCCT
GTGATGGTTG CCAGCTGTGG TGATGAGTTA GGTGATAAGA GCACTGCAAG TAAACCTCTG
GATTTTACTC CCTTTAAGGG CTTGATTAGC CTGATAACGC CGAATGTGCA GGAGTTGGCA
AGGCTAACTG CCGCCACAGA CAAACAAGCG TCAGCAATAC ACACAAAAGC AGAATTCGCC
GCTGCGGCAA TGCAACTCTC AGCGCAATTA GCGTGCAGCG TATTAGCCAA GGGCGGCGAT
ATTGATTTTG CGGCTCAAGC AAGTGATGGC ATTAACACCA GTGATCTCTT AAGCGATCAC
AAAAGCGATA TCACAAGTCA TCCCATCGTC ACAGATAATC AGCGTCTTGC GGAAGATCTG
CTGATTTGTC ATCAGGTTAC TGGCTGCTCA CCGCTTGACG CTAATGGCGG TTTTTGGCTG
AGCAGTGCGC GGATAAACAC GCGCCATAAC CATGGCAGTG GTTGTACTCT GTCTTCGGCC
ATCGCCTCGG TGTTAGCCTT TGGCTTTGTA TTGCAGGATG CAGTTGTGGT AGCAAAAGCC
TATGTCAATC AAGGCTTAAC TCATGCAGTG GGTGTTGGCC AAGGCCCAGG GCCACTGGCG
CGTACCGCTT GGCCGCACAA TTTAACGGCG TATCCTCACG TCACTGCTTA TTCTCAAAAC
AGCTTGAGTG AATCCAGTGA TTTGCAATGC GGCGCGTTTA ATCGCCTTGA TCCTGACTTA
GGGATTTATC CAGTTGTTGA TAACTTACTG TTACTCGAGC AGTTATTGGC GGCAGGCGTG
AAGACGGTAC AGCTCAGGAT AAAGTCTAAT GCACTAAAGT CTAATGTGCT GGCGTCGGAC
GAACTTGAGG CACAAATCCA AACCGCGATT GCCTTAGGTA AGCATTATGA TGCGCAGCTT
TTTATCAATG ATCATTGGCA GTTAGCGATA AAGCATGGCG CATTTGGGAT CCATCTCGGC
CAAGAAGATC TGGCGGTAAC GGATCTTAAC GCCATTCATG CAGCAGGACT GGCTCTTGGC
ATCTCGAGCC ACGGTTATTT CGAGTTGCTG CGTGCCCATC AACATGCGCC ATCGTACATC
GCCCTTGGGC ATATCTTCCC GACGACCACC AAGCAAATGC CATCGGCGCC GCAGGGATTA
TGTAAACTCA CTCATTATGT TGAGCTGTTA AATGCGCACT ATCCCTTAGT GGCAATTGGC
GGCATAGGAC CTTCGAATCT TGACCAAGTC AAAGCGACTG GGGTGAGCAA TATTGCCGTG
GTGCGGGCGA TTACCGAAGC AAATGATCCA GTAATGGCCT ATGCCGAATT GACTCGGGCT
TGGGAGTCAA GCCTATGA
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| Protein sequence | MTPAKHISLV APKPIVWTIA GSDSGGGAGI QADLATIKDL GGHGCSVITT LTAQSSVAVA
LVEPVSEAIL LTQLSTLLAD LPPQAIKIGL LANQQQVHLV ADWLAGFKTQ FPLVPVILDP
VMVASCGDEL GDKSTASKPL DFTPFKGLIS LITPNVQELA RLTAATDKQA SAIHTKAEFA
AAAMQLSAQL ACSVLAKGGD IDFAAQASDG INTSDLLSDH KSDITSHPIV TDNQRLAEDL
LICHQVTGCS PLDANGGFWL SSARINTRHN HGSGCTLSSA IASVLAFGFV LQDAVVVAKA
YVNQGLTHAV GVGQGPGPLA RTAWPHNLTA YPHVTAYSQN SLSESSDLQC GAFNRLDPDL
GIYPVVDNLL LLEQLLAAGV KTVQLRIKSN ALKSNVLASD ELEAQIQTAI ALGKHYDAQL
FINDHWQLAI KHGAFGIHLG QEDLAVTDLN AIHAAGLALG ISSHGYFELL RAHQHAPSYI
ALGHIFPTTT KQMPSAPQGL CKLTHYVELL NAHYPLVAIG GIGPSNLDQV KATGVSNIAV
VRAITEANDP VMAYAELTRA WESSL
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