Gene Shewmr7_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2083 
Symbol 
ID4258350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2459003 
End bp2459995 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content49% 
IMG OID638122751 
Productputative methyltransferase 
Protein accessionYP_738128 
Protein GI114047578 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID[TIGR00452] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.018552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.426363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGTT TCAGCTCCTT TTACCAACAA ATTGCCGATT CTAATTTGCA GCATTGGCTC 
GAAACTTTGC CCGCCATCTT AGGCAGGTGG CAGAGAGAAC ATAAACACGG CAACTTACCC
AAGTGGGAAA AAGTGCTCAA TAAGCTGCAC TATCCCGCCC CAGATCAGGT TGACTTTGTC
AGCAGTGTCA CCGTAGGCAC AGGCGAGCAA CTCACGCCCG GCGAAAAGGA AAAGCTTGAG
AACCTACTGC GCTTGTTTAT GCCTTGGCGC AAAGGCCCTT TTCATATCCA CGGCATTCAT
ATCGATACCG AATGGCGCAG CGATTGGAAG TGGGATCGCG TGAGCCCGCA TATTTCTCCT
TTGCAAAACC GCACAGTGCT TGATGTCGGC TGTGGCAGCG GCTATCACAT GTGGCGCATG
CTTGGTGCGG GCGCAAAACG CGTGGTGGGC ATCGACCCTT CGCCATTGTT TTTGTGCCAA
TTTGAAGCCG TTAAGCGCCT AAGTGGTGAA AATCATCCCG TGCACTTATT GCCGCTTGGC
ATTGAAGAGC TGCCACCGCT GGATGCATTC GACACGGTTT TCTCCATGGG TGTCTTGTAT
CACAGACGTT CACCCATTGA TCACTTGTTA CAATTACGTG ATCAGTTACG TATGGGTGGA
GAATTAGTGT TAGAAACTCT AGTAATAGAT GGTGATGAAA ACGCCGTACT CGTCCCTCAA
GATAGATATG GCAAAATGAA TAATGTATGG TTTATTCCAT CCGTCGCGGC TCTGATGCTC
TGGCTAAAGA AGTGTGATTT CACAGACATA CGTTGTGTCG ATACCGATGT CACCGCACTA
GCCGAACAGC GCCGAACCGA TTGGATGCCG AATGAGTCAC TGGTTGAATA TCTTGACCCT
AACGATATCA CTAAGACAAT CGAGGGTTAC CCAGCGCCGA AACGCGCAAC GATTATTGCG
GTGAAAAATC AACCCAATCA AGATTTGACC TAA
 
Protein sequence
MISFSSFYQQ IADSNLQHWL ETLPAILGRW QREHKHGNLP KWEKVLNKLH YPAPDQVDFV 
SSVTVGTGEQ LTPGEKEKLE NLLRLFMPWR KGPFHIHGIH IDTEWRSDWK WDRVSPHISP
LQNRTVLDVG CGSGYHMWRM LGAGAKRVVG IDPSPLFLCQ FEAVKRLSGE NHPVHLLPLG
IEELPPLDAF DTVFSMGVLY HRRSPIDHLL QLRDQLRMGG ELVLETLVID GDENAVLVPQ
DRYGKMNNVW FIPSVAALML WLKKCDFTDI RCVDTDVTAL AEQRRTDWMP NESLVEYLDP
NDITKTIEGY PAPKRATIIA VKNQPNQDLT