| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2082 |
|---|
| Symbol | |
|---|
| ID | 4257247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2458275 |
|---|
| End bp | 2459006 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638122750 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_738127 |
|---|
| Protein GI | 114047577 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0175574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.227653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTT CCCAAGATAC TATCTACGCT CAAGCGAGCG AACACATTAG CGATTTCCAG
TTTGATAACC GTGTCGCGGG TGTCTTCAGT GACATGATCC GCCGCTCGGT ACCTGGATAT
ACGCAAATTA TCAATACCAT TGGCGATTTT GCGGATCGTT TCGTCAAACC TAATACTCAA
GTATATGACT TAGGTTGTTC TTTAGGTGCA GCCACCTTAA GCATTCGTCG CCAGATCCAG
GGCCGCGATT GCCGCATCAT TGCCGTGGAC AACAGCGAAT CCATGGTGAC GCGCTGCCAA
GAAAACCTGA GTGCCTATGT GAGTGATACC GAAGTTGAGC TGATCTGCGG CGATATTCGC
GATATTCACA TCGAAAACGC CTCTTTAGTC GTGCTTAACT TTACCCTGCA ATTTTTACCG
CCAGAGGACA GAGAAGCGCT GATCGCAAAG ATTTATTACG GTTTAAATCC TGGCGGTCTG
TTAGTGCTGT CGGAAAAAAT TCGTTTCGAT GATGCGCCGA TTCAAAGTGT ACTCGAAGAA
CTGCACTTAG ACTTCAAACG CGCCAATGGC TATAGCGAGC TCGAAATCAG TCAAAAGCGC
AGTGCACTGG AAAACGTGAT GAAGCCCGAT ACCTTAAGCA TCCACCAGCA GCGTTTAACT
GGCCAAGGGT TTAGCCATTT TAGCTTGTGG TTCCAATGTT TTAATTTCTC TTCCATGGTA
GCCATCAAGT GA
|
|---|
| Protein sequence | MNASQDTIYA QASEHISDFQ FDNRVAGVFS DMIRRSVPGY TQIINTIGDF ADRFVKPNTQ
VYDLGCSLGA ATLSIRRQIQ GRDCRIIAVD NSESMVTRCQ ENLSAYVSDT EVELICGDIR
DIHIENASLV VLNFTLQFLP PEDREALIAK IYYGLNPGGL LVLSEKIRFD DAPIQSVLEE
LHLDFKRANG YSELEISQKR SALENVMKPD TLSIHQQRLT GQGFSHFSLW FQCFNFSSMV
AIK
|
|---|
| |