| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2079 |
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| Symbol | |
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| ID | 4257244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2452390 |
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| End bp | 2453136 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122747 |
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| Product | hypothetical protein |
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| Protein accession | YP_738124 |
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| Protein GI | 114047574 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00551786 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0017448 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGGTC ATAGTAAGTG GGCCAACATT AAACACCGTA AAGCAGCGCA AGACGCTAAA
CGCGGTAAAC TTTTTACTAA ATTCATTCGT GAATTAACTG TGTCGGCCCG TGAAGGCGGC
TCAGATCCCG ATTCAAACCC GCGTCTGCGT ATCGCAATCG ATAAAGCGCT CGGCGGCAAC
ATGACCCGCG ACACCATTGA GCGCGCAATC AAACGTGGCG CCGGTGAGCT TGAAGGGCAG
CAACTCGAAA CCATTATTTA CGAAGGCTAT GGCCCGGGTG GCACCGCTGT GATGGTTGAA
ACCATGACAG ATAACCGTAA CCGTACCGTG AGCGGCGTGC GTAATGCCTT TAGTAAATCG
GGTGGTAATT TAGGGACCGA TGGTTCGGTT GCCTATTTGT TCACTAAGCG CGGCGTGCTG
TCCTATGCGC CGGGCACAGA TGAAGACGCC CTGATGGACG CGGCGCTAGA AGCGGGCGCC
GAAGATGTGG TGAGCTACGA TGATGGTGCA ATAGACGTAT TTACCGAACC GACCGAGTTT
TACGGGGTGA AAGACGCCCT CGATGCGGCG GGATTTGTCA GTGATAACGC CGAAATCGCG
ATGATCGCCT CGACCAAAGC CGAGTTAGAT GCCGAGACGG CGGAGAAGTT TATGCGTCTT
ATCGATACCC TCGAAGAGCA CGATGATGTG CAAGAGGTGT ATCATAATGC CGAAATCTCC
GATGAGATTA TGGAAAGTTT AGGATAA
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| Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVSAREGG SDPDSNPRLR IAIDKALGGN
MTRDTIERAI KRGAGELEGQ QLETIIYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFSKS
GGNLGTDGSV AYLFTKRGVL SYAPGTDEDA LMDAALEAGA EDVVSYDDGA IDVFTEPTEF
YGVKDALDAA GFVSDNAEIA MIASTKAELD AETAEKFMRL IDTLEEHDDV QEVYHNAEIS
DEIMESLG
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