Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2058 |
Symbol | |
ID | 4255929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2426154 |
End bp | 2427245 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122726 |
Product | phosphoserine aminotransferase |
Protein accession | YP_738103 |
Protein GI | 114047553 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00301752 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000270653 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAGCGCGA TTTATAATTT CTGTGCAGGT CCAGCGATGT TACCCGCAGC GGTAATGAAA AAAGCACAAC AGGAATTACT CGATTGGAAT GGGCTAGGTG TCTCCGTGAT GGAAGTCAGC CACAGAGGTA AGGAATTTAT CGCGCTGACC AAGCAAGCTG AGGCGGATTT ACGCGAGCTG ATGCACATTC CACAGAACTA TCATGTGCTG TTTATGCACG GCGGTGGTCG CGGTCAGTTC TCTGCCGTTG TGAATAATTT TTTAGGCAAC CAAGGCCGAG CCCTGTATTT AGTCAGTGGT CAATGGTCTT CTGCAGCATT AGCCGAAGCT CAAAAGCTGG CGGGCGACGC GCAAATTGAT AGCCTTAACA TTGTTGAAAA ACAGAATGGA CTCAATGCAG TAGTGCTGCC TGATCTGCAT AAGATTGATG CCGATTACCG TTATGTGCAC TATTGCCCAA ATGAGACAGT TGATGGTATC GAAATTTTTG ATGAGTTAGA CAGTCCATGG CCCATTGTCG CCGACTTATC ATCTACCATT ATGTCCCGCG AAATCGATGT CAGTCGTTAC GGCTTAATCT ATGCTGGCGC ACAGAAGAAC ATTGGTCCTT CGGGCTTATC TATTGTGATC GTGCGTGATG ATATGTTGAA ACTGCCGAGT TTAACCCAAT CATCCATCAT GGATTACCGT TTAGCGGTGG AGCATGACTC CATGTTCAAT ACGCCGCCAA CCTTTGCTTG GTACTTAGCG GCTGAAGTGT TTGCTTGGCT AAAATCCTTA GGTGGTGTGG CCAGTATCGC GAAAATCAAT CAGCAAAAAG CGCAAATGCT GTATGCCTGT ATCGATGCCA ATCCTTTCTA TAAAAATGGT GTCGTCGCGG CAAACCGCTC ACAAATGAAC GTGACTTTCC AACTGGCGGA TGAATCCCTT GATGGCGCCT TCTTAAAAGA GGCCGAAGCG GCGAGCCTAG TGGCCTTAAA AGGGCACCGA ATCGTTGGTG GCATGCGTGC CAGCCTTTAC AATGCGATGC CACTTGAAGG TGTAGCCGCG CTGGTGAGCT TTATGAACGA ATTTGCGGCA AAACATAGCT AG
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Protein sequence | MSAIYNFCAG PAMLPAAVMK KAQQELLDWN GLGVSVMEVS HRGKEFIALT KQAEADLREL MHIPQNYHVL FMHGGGRGQF SAVVNNFLGN QGRALYLVSG QWSSAALAEA QKLAGDAQID SLNIVEKQNG LNAVVLPDLH KIDADYRYVH YCPNETVDGI EIFDELDSPW PIVADLSSTI MSREIDVSRY GLIYAGAQKN IGPSGLSIVI VRDDMLKLPS LTQSSIMDYR LAVEHDSMFN TPPTFAWYLA AEVFAWLKSL GGVASIAKIN QQKAQMLYAC IDANPFYKNG VVAANRSQMN VTFQLADESL DGAFLKEAEA ASLVALKGHR IVGGMRASLY NAMPLEGVAA LVSFMNEFAA KHS
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