Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2057 |
Symbol | |
ID | 4255928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2424706 |
End bp | 2425896 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122725 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_738102 |
Protein GI | 114047552 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00131277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000291193 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTTAACT CACTCGTCGC AATGCCTGCG GATCCTATCC TCGGCCTATT AACCCAGTAC CGTGAAGACT CACATCCTCA AAAAGTCGAC TTAGGTGTGG GCGTTTATAA GGATCCCGCT GGAAACACTC CCATCCTTAA TTGCGTGAAA AAAGCCGAAA AATTCCGTTT AGACACTGAA ACCACCAAAG TGTATATCGG CCCAACCGGT TCGCCTCAGT TTAATACCCT GATAACAGAA TTAGCCTTTG GCAGTGATCA CAGCGCGATT ATCGCCAACC GAATTCGTAC TGTATCAACG CCTGGTGGTA CAGGCGCCCT GCGCGTTGCC GGTGATTTTA TTAAACGCTG CAATCCTAAT GCTGTGCTAT GGGTGAGCGA TCCCACATGG GCTAACCATA TAGGCTTGTT TGAAGCGGCG GGTCTGGCCG TTAAAACCTA CCCTTACTAT GATTACGACA CTAAGTCGTT AAAGTTCGAT GAGATGCTCA GCGCGCTTAC GCAGATTGGC CCGAACGATG TGGTGCTGTT CCACGCCTGT TGCCATAACC CGAGCGGGAT GGATTTAACG ACAGAACAAT GGGATAAAGT GGTTGCCCTC ACCAAGGAGC AAGGTTTTAC CCCGCTTATC GACATGGCTT ACCAAGGTTT TGGTGATGGT GTCGATATCG ATGCCTACGG CGTACGTAAA ATGGCCGCAG CGGTCGATAA TATGATCCTG TGTAGCTCTT GCTCGAAAAA CTTTGGTCTG TACCGTGAGC GTATCGGCTC ATGCTCTGTG GTTGCAAAAG ATGCAAACAC GGCAAACATC GCGCAATCTG TACTGCTTTA CGTAGTTCGC TGCCTCTACT CCATGCCGCC AGCCCACGGC GCAGCGATTG TCGAAACCAT TCTAGGTTCG GCGGAATTAA AGCAAGAGTG GTTAGATGAG CTCAAAGTGA TGCGCGACCG TATCAACGGT AACCGCGCCA TTTTAGTGGA AAAACTTAAA ATCAATGGCG TGGACCGCGA CTTTAGCTTT ATCGCACGCC AAAAAGGCAT GTTCTCTTTC CTAGGGGTTA ATCCTGAGCA AGTCGCGCGT CTGCAGAAAG AATTCAGCAT TTATATGGTG GGTTCGAGCC GCATTAGCAT TGCAGGCATT AGCGAAGACA ATGTGGATTA CTTAGCTAAG TCGATTGCCG AAGTACTGTA A
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Protein sequence | MFNSLVAMPA DPILGLLTQY REDSHPQKVD LGVGVYKDPA GNTPILNCVK KAEKFRLDTE TTKVYIGPTG SPQFNTLITE LAFGSDHSAI IANRIRTVST PGGTGALRVA GDFIKRCNPN AVLWVSDPTW ANHIGLFEAA GLAVKTYPYY DYDTKSLKFD EMLSALTQIG PNDVVLFHAC CHNPSGMDLT TEQWDKVVAL TKEQGFTPLI DMAYQGFGDG VDIDAYGVRK MAAAVDNMIL CSSCSKNFGL YRERIGSCSV VAKDANTANI AQSVLLYVVR CLYSMPPAHG AAIVETILGS AELKQEWLDE LKVMRDRING NRAILVEKLK INGVDRDFSF IARQKGMFSF LGVNPEQVAR LQKEFSIYMV GSSRISIAGI SEDNVDYLAK SIAEVL
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