Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2044 |
Symbol | |
ID | 4258206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2411333 |
End bp | 2412874 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122712 |
Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
Protein accession | YP_738089 |
Protein GI | 114047539 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.754116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0297059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACT CGATAAACAA GGATCAGTTA CAGGCATCAT TCACTCGCCC CAAGCTTAAG GGATTACTTT TAGGCAGCAT GTTAAGTATT CTGCTGCCAA CCCAAGCGAT TGCAGCAATT CATCCGCTGG ATGAGTCGAC ATTTGCCAAG CAAATCGCCG ACATTGCCCC GCGTCATTCG CAAGTCGCTT TGCTGGCCCG TGATTTAAGT ACTAATACCC TGTTATACAG CCAGCAAGCC GATACCTTAT TTATCCCCGC CAGCACGCAA AAGGTGCTGA CCGCCGTGAC CGCTATGGCC AGCCTTGGCC CAGATTTTCG CTATGTCACT GAGCTGTGGA GTGATGCGCC CATTCGCCAA GGTCATATTG CGGGCAGTGT TTATCTGCGT TTTAGCGGCG ATCCAACGCT GACTCAGGAC GATCTCAAAG CCTTGTTTGC CCATCTACAA AAGCAAGGCA TAACAAGCAT TGAGGGGCAT CTCTATCTGA TCGGGGATAA ACAGGAACAA TTACAAGCAC CTGGTTGGGT GTGGGATGAC CTAGGGATTT GCTTTGCAGC GCCGGTATCC AGTTACATCA TCAATCAAAA CTGCGTTTAT GGGCAGTTTG CGCCAAGCTC AGCCAAACAT GCCTCTGAGG TCAAATTAAG GGCATCCAGT TTTGGGGTGA AAGTCAGTAG CGATGCCATA TTCTCCCCTA AAGCAGGCCA TGATTTTTGC CAGCTCGATT TAGTACGCCT TGGCCAGAAC CAATATCATC TACGCGGCTG CTATCCCGGC AGTGAAGCGA TACCACTGGC GATTGCCATT AGCGATCCCG AAAAATTTGC CATGGACACC CTAACCGCGA CGCTCAAGGG GGAAATATCA CTTTCGGGGA AAGTGAAAAT AGGCAATACC ATCCCTTCTA AGGCGAAACT GATTGCCAGC CATAGCAGCG CGCCCTTGCC TGAGCTGTTA AAAACCATGC TGTTGAAGTC GGATAACCTC ATCGCCGATA GTTTGTTTAA GCGCGTGGGG CAAAATTATT ACAAAGCCCA AGGCAGCTTT ACCCATGGTG CTGCGGCTAT GCGCCATATT CTGACTGAGC TTGGGATTGA TTTAACCAAC GCTAATATTG TCGATGGTTC AGGGCTTTCT CGCTATAACC TGTTGAGCGC AAAACAGTTA GCCGATGTAC TGGCGCTCAT TTACCAAGAT GCACGCTTTC ACACCCTCAT TGACAGTTTG CCCGAGGCCG GTGTCAGCGG CACACTGCAA TATCGCTTGG GATATACTAA ACCGCCCTTA AAACATCTAG TGTTTGCCAA AACAGGTTCG ATGCAGGGCG TCGCCAATTT AGCTGGCTTT ATGCGTTTAG CGCAGCAGCG AGATATTCTC TTTGTGGTGC TCGAGAATGG CATCAGTCCT GAAACCAAAA AGCAACGTAA ACCCGCCTTT AGCGCCGACT TTTTAACTCG GTTGCTGAGT GCTGTCGAAA CTCAGACTCA GACCAGCCAA ACAACGACCA CAGAGCTCAA CACCGTTAAG TTAAGTGATT AA
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Protein sequence | MTHSINKDQL QASFTRPKLK GLLLGSMLSI LLPTQAIAAI HPLDESTFAK QIADIAPRHS QVALLARDLS TNTLLYSQQA DTLFIPASTQ KVLTAVTAMA SLGPDFRYVT ELWSDAPIRQ GHIAGSVYLR FSGDPTLTQD DLKALFAHLQ KQGITSIEGH LYLIGDKQEQ LQAPGWVWDD LGICFAAPVS SYIINQNCVY GQFAPSSAKH ASEVKLRASS FGVKVSSDAI FSPKAGHDFC QLDLVRLGQN QYHLRGCYPG SEAIPLAIAI SDPEKFAMDT LTATLKGEIS LSGKVKIGNT IPSKAKLIAS HSSAPLPELL KTMLLKSDNL IADSLFKRVG QNYYKAQGSF THGAAAMRHI LTELGIDLTN ANIVDGSGLS RYNLLSAKQL ADVLALIYQD ARFHTLIDSL PEAGVSGTLQ YRLGYTKPPL KHLVFAKTGS MQGVANLAGF MRLAQQRDIL FVVLENGISP ETKKQRKPAF SADFLTRLLS AVETQTQTSQ TTTTELNTVK LSD
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