| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2039 |
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| Symbol | ampC |
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| ID | 4258201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2406191 |
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| End bp | 2407444 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638122707 |
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| Product | beta-lactamase |
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| Protein accession | YP_738084 |
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| Protein GI | 114047534 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.285655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.138776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAT TTAGTCAGTC CCTCCTAAGA CATCCCCATA ATGCCCGATT TTCAGGTCAA
TTGAGTTCAA ATCGTTTGGG GCCAACCGTG TTAGGCTTAT TGCTGCTCTC GACTACGCCA
TTGTTAGCCT ATGCAGCATC AGATGCGCGC AATGCGGAAC ACATACAAAC AGAGCAGATC
CAAGCCCTTG TAGATTCGGC GATCAATCCC TTAATGACAG AGTATGGGAT CCCTGGTGCA
ATCGTTGGGA TCAGCCTCAA TGGGCAAAGG TATTTCTTCC CCTATGGTGT TAGCTCTAAG
ACCAGCAATC AAAGAGTCAG TACAAACACA TTGTTTGAGA TAGGTTCCAT CAGTAAAACC
TTTACCGCGA CACTCGCAAC TTATGCTCAA GTTCAAGGGA AACTCACACT CACGGATAAG
GTGAGTGAGT ATGTGCCCGA ATTAAGGGGC AGTGCTTTTG ACCAGATAAG TCTTATCAAT
CTCGCGACCC ATACCGCGGG CGATTTGCCC ATGCAAGTGC CTGATAAGGT GACCAACAAT
GTTGAATTAA TGCGTTATTT TAAAGAATGG CAACCCGCTT ATGCCGCGGG AACACACCGT
AACTATGCCA ATCCCAGCAT TGGCTTACTC GGCTTAATTG CGGCAAAACA GTTGGGGCAA
AGCTTTCCTG AGGCCATGGA ACAAACCGTC TTTCCACAAC TTGGCATGAC TAGCAGTTAT
CTTAAGGTGC CAACAAATAA AATGGTTGAT TATGCCCAAG GTTATAATAA GCAAGACCAG
CCGGTGCGTC TTAATCCCGG CGTATTGGCC GATGAGGCTT ACGGAATAAA AACATCTGCC
GTCGATCTAC TGCGTTTTGT TGAGACTAAT ATGCAACAGC ATACTATTTC TAACACGCTG
CAACAGGCTA TCGATGCCAC ACATATGGGC TATTTTGATG TGGGCATGAT GACACAAGAG
ATGATTTGGG AGCATTATCC CTATCCAATA ACCCTCGACA AGCTACTTGC GGGACATACT
CAAGATGTAG TGTTTGGTAG CATGCCAGTT AAAGCCATCG AGCCGCCACA AGTACAACAG
CCTGATCAGT GGGTAAATAA GACTGGCTCA ACCGGCGGTT TTGCCGCCTA TGTGGCTTAT
CTTCCCGCAA AAAAACTGGC CATGGTGTTA CTCAGTAATA AAAATTATCC CGTGCACCCT
AGGGTGACTG TGGGCTACCA AATATTAACC AGTTTAGAAA CACTGCCAAA CTAA
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| Protein sequence | MSTFSQSLLR HPHNARFSGQ LSSNRLGPTV LGLLLLSTTP LLAYAASDAR NAEHIQTEQI
QALVDSAINP LMTEYGIPGA IVGISLNGQR YFFPYGVSSK TSNQRVSTNT LFEIGSISKT
FTATLATYAQ VQGKLTLTDK VSEYVPELRG SAFDQISLIN LATHTAGDLP MQVPDKVTNN
VELMRYFKEW QPAYAAGTHR NYANPSIGLL GLIAAKQLGQ SFPEAMEQTV FPQLGMTSSY
LKVPTNKMVD YAQGYNKQDQ PVRLNPGVLA DEAYGIKTSA VDLLRFVETN MQQHTISNTL
QQAIDATHMG YFDVGMMTQE MIWEHYPYPI TLDKLLAGHT QDVVFGSMPV KAIEPPQVQQ
PDQWVNKTGS TGGFAAYVAY LPAKKLAMVL LSNKNYPVHP RVTVGYQILT SLETLPN
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