| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2038 |
|---|
| Symbol | |
|---|
| ID | 4258200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2404997 |
|---|
| End bp | 2405761 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122706 |
|---|
| Product | DTW domain-containing protein |
|---|
| Protein accession | YP_738083 |
|---|
| Protein GI | 114047533 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3148] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.111033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.127939 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAG CCCCCCACGC TGTACATCGT TTATATGAAT ACCGTAAATC CCTTTCAACT
AAGCCCTTTG GCGCCCGCGG AAAAAAACTC ATCCGCTGTC ACTTGTGTTT ATTGGGTGAG
CAATTCTGTA CCTGTTCGCT GCGTAAACAG TTGACTACTC AGGCAAGTTT TATGCTTATC
ATGTATAACG ATGAGGTATT AAAACCCACC AATAGTGGCC GCTTGATTGC CGATCTTATT
CCCGATACTC ATGCCTTTCT CTGGTCGCGC ACCGAACCCG CTCCTGAGCT GCTGGCACTA
TTGGCCTCAA GCGACTATCA ACCCTTTTTA GTCTTTCCCG CGCAATATGC CGACCAAGGG
CAAACCGTAT TGACTGAAGT TCCTATGGCG AGTCTTGCCG AGGGTAAACG ACCTTTGCTG
ATTATGCTCG ACGGCAGTTG GCGTGAGGCA ATTAAGATGT TTCGCAAGAG TACCTATCTG
CAAGGCTTAC CTATGTTGTC CTTCGATCCC GACACCTTAG CAACCTACGC CCTGCGTAAG
GGCAGCCATG ACTTTCAATT AGGTACAGCG GAAGTTGCCT CGCTGGCGCT GGCGGCTATG
GGCGAAGAGG TCAATGCCAA GGCATTAACG GCATGGTTCG ATTTGTTTGT GGAGTCCTCA
TTGCTCGGCC GTAACCGCCG CTGCCGTGAA GACATTTTAC CCATCAGCGA TTTTACCGAC
GCCTTTGAAG CGGCGTACAG TGCTGCAACC CCCGCCAAGC TGTAA
|
|---|
| Protein sequence | MALAPHAVHR LYEYRKSLST KPFGARGKKL IRCHLCLLGE QFCTCSLRKQ LTTQASFMLI
MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TEPAPELLAL LASSDYQPFL VFPAQYADQG
QTVLTEVPMA SLAEGKRPLL IMLDGSWREA IKMFRKSTYL QGLPMLSFDP DTLATYALRK
GSHDFQLGTA EVASLALAAM GEEVNAKALT AWFDLFVESS LLGRNRRCRE DILPISDFTD
AFEAAYSAAT PAKL
|
|---|
| |