| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2037 |
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| Symbol | |
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| ID | 4258199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2403480 |
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| End bp | 2404736 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122705 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_738082 |
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| Protein GI | 114047532 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.421969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.135437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAC CATCTGTTAC AGCGAGTTTT ATTGTGCCAC GCTTAAGCTC ATTTCCCCTT
TATCTGAGTG GTGTTTTGCT CTGTCTCTCT GTGAGTGGCT GCCAAGAACC CGACATCAAA
ATCTCCCCCA AAATGGTAGT GGTGGAAAAA GTCACTACGG CTACCGTGCC GCTCTACGGT
AATTATATCG GCGTGACCCA AGCCTCCTTA GATGTGGAAG TACGGGCGCG GGTCGATGGT
TTTGTGGAGG AAAAACGTTT TGTCGAAGGC AGCGCGGTAA AAGCGGGTGA ACTGCTGTAT
CAGATTGATA ATAAACCCTA TGTAGCTGTG GTGAATCGGT TAAAGGCCAA ACTCTCTTCA
CAACAGGCCA TTGTTGATAA GGCCGAGCGG GATGTTAAAC GTCTAAAGCC GCTATATGAG
CAAGATGCCG CCAGTCAGCT TGATTATGAT AATGCACTTT CCACACTGGC TCAGGCACGA
TCTAACCTCA CCGCGAGCCG CGCCGAAGTG GAGGAGGCCG AATTAGAGCT GAGTTATACC
GAAATTAAGG CGCCAATTGC GGGGCTTGTG AGTCGCTCCG AGGTAGATAT TGGCGCACTC
GTGGGCAGTA AGGGCCAATC GCTCCTGACG CGCGTTAAAC AAGTTGACCC GATTTATGTC
AGCTTTAATA TGTCGGCGCT CGATTACTTA AATGCCCAGC GACGCTTGAC CAGTTACTCG
GCGAAGAAAG AAGCTGAGGT TGAAGGTAAG GCACTGGCAG GCTTTGTGCG GATAACGCTC
CCCGATAACA GTGAATACCG CTATTTAGGG GATGTGAGTT TTACCGATCC CCAGGTTAAT
CCTAATACTG GCACCTTCGA GGTGCGGGCC ATTCTGCCCA ACCCTGAGAA GGAGCTGTTG
CCCGGCCAAT ATACCAATGT ACGGATTAAA TTATCCGAAA TCCCCAATGC GATTGTCATC
CCGCAAAGAG CCACCCAAGT GGACCAAGGC GGGGTATACG TGATGGTAGT ATTGCCCAAT
AACACCGTCG AACGGCGCTT TATCGTGATC GATCACCAAG GGATTGAAGG TGTGGTGGTC
AAAAGTGGCC TCAAGGCTGG GGAGATGGTG ATCACCGAAG GTATGCACCG TGTACGCCAC
GGGCAAATTG CTGAGCCATT AAGTGCGAAG GAATACGCCG AGAAGGAAGA CGAAATGTCA
AAAGCCGAGG CACTTAAGCG CCAAGCCTTG GAGCAGCAAA AGCAGGAGCA AAAATAA
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| Protein sequence | MPQPSVTASF IVPRLSSFPL YLSGVLLCLS VSGCQEPDIK ISPKMVVVEK VTTATVPLYG
NYIGVTQASL DVEVRARVDG FVEEKRFVEG SAVKAGELLY QIDNKPYVAV VNRLKAKLSS
QQAIVDKAER DVKRLKPLYE QDAASQLDYD NALSTLAQAR SNLTASRAEV EEAELELSYT
EIKAPIAGLV SRSEVDIGAL VGSKGQSLLT RVKQVDPIYV SFNMSALDYL NAQRRLTSYS
AKKEAEVEGK ALAGFVRITL PDNSEYRYLG DVSFTDPQVN PNTGTFEVRA ILPNPEKELL
PGQYTNVRIK LSEIPNAIVI PQRATQVDQG GVYVMVVLPN NTVERRFIVI DHQGIEGVVV
KSGLKAGEMV ITEGMHRVRH GQIAEPLSAK EYAEKEDEMS KAEALKRQAL EQQKQEQK
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