| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2030 |
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| Symbol | |
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| ID | 4258192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2391756 |
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| End bp | 2393753 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638122698 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_738075 |
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| Protein GI | 114047525 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.371966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGATA AGGATTTGTT TATGTCTTAC CCTACAACGC CGTCAACTCA GGCCTCGGAA
TATACGTCAT TATTACAGCA ACAGTTTGGT TTTGATGGGT TCAGGCAAGG GCAACATGAG
GTTGTCTCGC AGTTGTTGTC GGGCCATTCG AGCCTTGCTA TTTTTCCCAC CGGCTCAGGA
AAATCACTCT GTTACCAATT TACCGCTCTG CAACTTCCCC ATTTAACCTT AGTGGTGTCA
CCCTTACTGG CGTTGATCAA AGATCAACTG AGTTTCCTGC ATGAGAAGGG CATTAAAGCG
GCAAGTATCG ACTCAACCTT AACGCCTGAA TTAACCCAAC AGGTCATGCG TGATGCTCGC
TCTGGCGAGT TAAAACTCTT GATGGTATCG GTTGAACGTT TTAAAAATGA GCGCTTTAGG
CAATTTATTC AATCAATTCC TATCTCTATG CTGGTTGTCG ATGAAGCGCA CTGCATCTCG
GAATGGGGAC ATAATTTTCG CCCCGACTAT TTAAAGCTTC CCGATTATCG CCGTGAATTA
GCAATTCCAT TGGTGTTGTT ACTCACGGCG ACCGCGACAC GTAAAGTGAA ACTGGATATG
GCGGCGCGTT TCGATATCAA GCCACAACAT ATTGTTCAAA CAGGCTTTTA TCGTTCAAAC
CTCGACTTGA CCGTCTTGCC TGTAGCAAGC CAACACAAAC TGACGGCATT GCAACAGCAG
CTTAATCACT TTACTGGTGC GGGGATTGTG TATGTGACTT TGCAGCATAC TGCTGAGGAT
GTTGCCGCGA AACTTTGCCA AATGGGCTTT GATGCGAGTG CCTATCATGC GGGGTTTGAG
GATGAAAAAC GTCAGCAAAT TCAGCAGGAT TTTATGCAAG GTAAGATCCG CATCGTGGTT
GCGACTATCG CCTTTGGTAT GGGCATAGAC AAAAGCAATA TTCGCTTTGT GGTTCACTAC
GATCTGCCTA AATCCATAGA GAATTATTGC CAAGAAATTG GCCGTGCAGG AAGGGATGGC
CAGCTCTCAC ATTGCGTGAC CTTGGCCAAT TTAGATGGCA TAAACACAGT CGAAAATTTT
GTTTACGGCG ATACACCGGA ACTGGCCAGT ATTACTGCCG TGATTGATAA CATTCGCGAA
GAAACCCATA ACGGACGTTG GGAGCTGCAA CTGCATCAGC TATCAAATGT GAGTAATATC
AGGCAGCTCC CCCTTAAAAC CTTGCTAGTT CAGCTTGAAA TGATAGGCGT GATTAAGCCG
CTTTATGCTT ATTACGCCGA TATCAGTTAC CGTTTTATTG AGCCACAGGC GCAGATCTTG
AGCCAGTTTT CCCCCGAGCG TCAGGCATTT TTAAATGACA TCTTTACCCA TACTCAGATG
AAACGAGTAT GGGGCAGTTT AGATTTTTCC GCGCTCTACC AAGCCACAGG TGCAGAACGT
ACACGGGTAT TAGCGGCATT AGAATATCTT GCCAGTCAAC AGCTTATCGA ATTGGAAGCT
AAGCGAGTAA CGGATGTCTA TCAAGTGAAT GCTGAGGTGT TAGCACAGGG GCATTTAGCC
GATGAGCTCC ATCAATACTT TACCGACAAA GAGGCGAAAG AAGTCGCCCG TATTGCCCAG
TTAGTGCGAT TTTTTGAGCT AACGACTTGC TTAAATTACA ATTTGGCCCG CTATTTTGAT
GATAATGCCG CGCCTCAATC CTGTGGTCAT TGCAGTGTTT GCCGTGGTCA AATGGCTAAA
TTGGCGTATT CAGAAGAGCC AAAGTGGCCT GATGATGCTC AGCTTAAGGC CGATTTGCAT
GAACTGGAGC GTTTAGCGGA GTCGAAAGGT TTAGCTTCAT TATCCTTAGA TACTCAATGC
CGGTTTTTGG CTGGAATGAC ATTACCGCTG TTTACTCGCT TACAAGTGCG GAAATTATCG
GGCTATGGTC GCTGCGAATA CCTCCGATAT GCAGAGATTA AAGCCAAATT AGCGCAGTTA
GTCGACGCAC CTTGCTGA
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| Protein sequence | MGDKDLFMSY PTTPSTQASE YTSLLQQQFG FDGFRQGQHE VVSQLLSGHS SLAIFPTGSG
KSLCYQFTAL QLPHLTLVVS PLLALIKDQL SFLHEKGIKA ASIDSTLTPE LTQQVMRDAR
SGELKLLMVS VERFKNERFR QFIQSIPISM LVVDEAHCIS EWGHNFRPDY LKLPDYRREL
AIPLVLLLTA TATRKVKLDM AARFDIKPQH IVQTGFYRSN LDLTVLPVAS QHKLTALQQQ
LNHFTGAGIV YVTLQHTAED VAAKLCQMGF DASAYHAGFE DEKRQQIQQD FMQGKIRIVV
ATIAFGMGID KSNIRFVVHY DLPKSIENYC QEIGRAGRDG QLSHCVTLAN LDGINTVENF
VYGDTPELAS ITAVIDNIRE ETHNGRWELQ LHQLSNVSNI RQLPLKTLLV QLEMIGVIKP
LYAYYADISY RFIEPQAQIL SQFSPERQAF LNDIFTHTQM KRVWGSLDFS ALYQATGAER
TRVLAALEYL ASQQLIELEA KRVTDVYQVN AEVLAQGHLA DELHQYFTDK EAKEVARIAQ
LVRFFELTTC LNYNLARYFD DNAAPQSCGH CSVCRGQMAK LAYSEEPKWP DDAQLKADLH
ELERLAESKG LASLSLDTQC RFLAGMTLPL FTRLQVRKLS GYGRCEYLRY AEIKAKLAQL
VDAPC
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