| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2029 |
|---|
| Symbol | |
|---|
| ID | 4258628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2391121 |
|---|
| End bp | 2391672 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638122697 |
|---|
| Product | ecotin |
|---|
| Protein accession | YP_738074 |
|---|
| Protein GI | 114047524 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4574] Serine protease inhibitor ecotin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.28403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA CTCACGTATT TAAGACTGCG GCCCTTCCCC TCGCCTTTGC ATTACTGTCT
TTTAATGCCG CAGCAGTGAG CCCACCACAT CCAACAGGAT TAAATGCACC TATGATCAGT
ATCGCGAGTT TCAACCATAA AACTTATGCC GAGCAAGAAG CCACGAAAAT GTTTCCAGCT
CCTGAGGCGA GTATGGTGCA ACATATTTTG ACCTTACCTA AACTCGAAAA TGAAGACGAC
TACATGGTTG AAATCCAAAT TGGCCAGACC CAATTAGTCG ACTGTAATAA GCATGGTCTG
AACGGCGAAT TAAAAGAACT CTCGGTTAAG GGCTGGGGTT ATAGCTATTA TCAAGTGTCT
GAAGTCTCTG AAGGCCCAAG TACCATGATG GCCTGTTTCG AGATGGCGAA AAAAGAAGCC
TTTGTCCGCA TTCCAGGTGA ACTTAAAATG CGTTACGACA GCCGTTTACC GAAGGTATTC
TATCTGCCAG AAGGCACGGA GTTACGTTTT AGAACCTGGA AAGTCGATTC AACTTATCAC
TACGCTAAAT AA
|
|---|
| Protein sequence | MKLTHVFKTA ALPLAFALLS FNAAAVSPPH PTGLNAPMIS IASFNHKTYA EQEATKMFPA
PEASMVQHIL TLPKLENEDD YMVEIQIGQT QLVDCNKHGL NGELKELSVK GWGYSYYQVS
EVSEGPSTMM ACFEMAKKEA FVRIPGELKM RYDSRLPKVF YLPEGTELRF RTWKVDSTYH
YAK
|
|---|
| |